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Worm Phenotype (WP): locomotor coordination variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   Variant [WBPhenotype:0000886] <2>
+ + + + + 5:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + + + 4:   behavior variant [WBPhenotype:0000517] <2>(119|121) (119|54|20)
+ + + 3:   organism behavior variant [WBPhenotype:0000525] <20>(119|121) (119|54|20)
+ + 2:   movement variant [WBPhenotype:0001206] <4>(48|56) (48|25|14)
+ 1:   locomotion variant [WBPhenotype:0000643] <4>(46|52) (46|23|12)
0:   locomotor coordination variant [WBPhenotype:0004017] <7>(18|21) (18|7|1)
- 1:   spastic locomotion [WBPhenotype:0001701] <6>(0|0) (0|0|0)
- 1:   kinker [WBPhenotype:0000002] <3>(0|0) (0|0|0)
- 1:   coiler [WBPhenotype:0000565] <2>(0|0) (0|0|0)
- 1:   directionality variant [WBPhenotype:0001702] <2>(15|16) (15|6|1)
- 1:   path curvature variant [WBPhenotype:0002335] <2>(6|6) (6|3|0)
- 1:   roller [WBPhenotype:0000645] <2>(2|3) (2|0|0)
- 1:   sinusoidal movement variant [WBPhenotype:0004018] <2>(10|14) (10|5|1)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
SNF-like0.00000000000009268Direct
Transducin (alpha subunit), insertion domain0.00000000000105Direct
Neurotransmitter-gated ion-channel transmembrane pore0.00000000007238Direct
Nicotinic receptor ligand binding domain-like0.0000000002177Direct
Transducin (heterotrimeric G protein), gamma chain0.000008343Direct
E2F-DP heterodimerization region0.000008343Direct
Voltage-gated potassium channels0.00003677Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.0001342Direct
Ankyrin repeat0.001347Inherited
Fibronectin type III0.002293Inherited
Insulin-like0.003505Inherited
PH domain-like0.004514Inherited
SMAD MH1 domain0.009787Inherited
P-loop containing nucleoside triphosphate hydrolases0.03444Inherited
SMAD/FHA domain0.05737Inherited
Homeodomain-like0.07315Inherited
cAMP-binding domain-like0.07604Inherited
PLP-dependent transferases0.09601Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
SNF-like0.0000000000003025Direct
Transducin (alpha subunit), insertion domain0.000000000001882Direct
Nicotinic receptor ligand binding domain-like0.0000000001705Direct
Neurotransmitter-gated ion-channel transmembrane pore0.0000000001705Direct
G proteins0.0000005971Direct
Transducin (heterotrimeric G protein), gamma chain0.00001589Direct
Cell cycle transcription factor e2f-dp0.00001589Direct
Pyridoxal-dependent decarboxylase0.00008192Direct
Voltage-gated potassium channels0.00012Direct
Pleckstrin-homology domain (PH domain)0.0001435Direct
Rhodopsin-like0.000168Direct
PLC-like (P variant)0.0002657Direct
Fibronectin type III0.002557Inherited
I set domains0.003803Inherited
Insulin-like0.00399Inherited
Ankyrin repeat0.006006Inherited
SMAD domain0.009278Inherited
SMAD MH1 domain0.009278Inherited
Synaptotagmin-like (S variant)0.03371Inherited
Homeodomain0.05561Inherited
cAMP-binding domain0.07499Inherited


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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
SNF-like0.00000000000007278Direct
Transducin (alpha subunit), insertion domain0.0000000000008267Direct
Neurotransmitter-gated ion-channel transmembrane pore0.00000000005725Direct
Nicotinic receptor ligand binding domain-like0.0000000001725Direct
E2F-DP heterodimerization region0.000006783Direct
Transducin (heterotrimeric G protein), gamma chain0.000006783Direct
Voltage-gated potassium channels0.00003003Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.00011Direct
Ankyrin repeat0.001124Inherited
Fibronectin type III0.001928Inherited
Insulin-like0.002966Inherited
PH domain-like0.003831Inherited
SMAD MH1 domain0.008413Inherited
P-loop containing nucleoside triphosphate hydrolases0.03031Inherited
SMAD/FHA domain0.05102Inherited
Homeodomain-like0.06545Inherited
cAMP-binding domain-like0.06811Inherited
PLP-dependent transferases0.08658Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
46785,144074
  • 46785 - "Winged helix" DNA-binding domain
  • 144074 - E2F-DP heterodimerization region
  • 0Direct
    47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0000000000008267Direct
    63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 0.00000000005725Direct
    48726,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.0009476Direct
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.0009811Direct
    48403,48403
  • 48403 - Ankyrin repeat
  • 48403 - Ankyrin repeat
  • 0.008413Inherited
    47473,47473
  • 47473 - EF-hand
  • 47473 - EF-hand
  • 0.03047Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.001034Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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