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Worm Phenotype (WP): locomotor coordination variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <4>
+ + + 3:   behavior variant [WBPhenotype:0000517] <2>(133|132) (134|53|20)
+ + 2:   organism behavior variant [WBPhenotype:0000525] <21>(133|132) (134|53|20)
+ 1:   movement variant [WBPhenotype:0001206] <9>(65|65) (65|25|9)
+ 1:   locomotion variant [WBPhenotype:0000643] <9>(74|80) (74|32|15)
0:   locomotor coordination variant [WBPhenotype:0004017] <7>(19|22) (19|7|1)
- 1:   spastic locomotion [WBPhenotype:0001701] <6>(0|0) (0|0|0)
- 1:   coiler [WBPhenotype:0000565] <2>(0|0) (0|0|0)
- 1:   directionality variant [WBPhenotype:0001702] <2>(15|16) (15|6|1)
- 1:   kinker [WBPhenotype:0000002] <2>(0|0) (0|0|0)
- 1:   path curvature variant [WBPhenotype:0002335] <2>(6|6) (6|3|0)
- 1:   roller [WBPhenotype:0000645] <2>(2|3) (2|0|0)
- 1:   sinusoidal movement variant [WBPhenotype:0004018] <2>(12|16) (12|6|1)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0.000000000000002673Direct
SNF-like0.00000000000006814Direct
Neurotransmitter-gated ion-channel transmembrane pore0.0000000000003886Direct
Nicotinic receptor ligand binding domain-like0.00000000000115Direct
E2F-DP heterodimerization region0.000007534Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.00002418Direct
Voltage-gated potassium channels0.0001386Direct
Insulin-like0.0005586Direct
Spectrin repeat0.0007898Direct
Ankyrin repeat0.001678Inherited
PH domain-like0.002366Inherited
SMAD MH1 domain0.003426Inherited
Transducin (heterotrimeric G protein), gamma chain0.003426Inherited
Fibronectin type III0.00443Inherited
SMAD/FHA domain0.01877Inherited
P-loop containing nucleoside triphosphate hydrolases0.03826Inherited
PLP-dependent transferases0.04603Inherited
Homeodomain-like0.07918Inherited
cAMP-binding domain-like0.09058Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0.000000000000009398Direct
SNF-like0.000000000000241Direct
Neurotransmitter-gated ion-channel transmembrane pore0.000000000002004Direct
Nicotinic receptor ligand binding domain-like0.000000000002004Direct
Rhodopsin-like0.000001365Direct
G proteins0.000003295Direct
Cell cycle transcription factor e2f-dp0.00001479Direct
Pleckstrin-homology domain (PH domain)0.00004679Direct
Pyridoxal-dependent decarboxylase0.00007502Direct
Voltage-gated potassium channels0.0001244Direct
PLC-like (P variant)0.0007822Direct
Insulin-like0.000828Direct
Spectrin repeat0.0009171Direct
Transducin (heterotrimeric G protein), gamma chain0.003576Inherited
SMAD domain0.003576Inherited
SMAD MH1 domain0.003576Inherited
Fibronectin type III0.006134Inherited
Ankyrin repeat0.006287Inherited
Synaptotagmin-like (S variant)0.01384Inherited
I set domains0.01499Inherited
Homeodomain0.08324Inherited
cAMP-binding domain0.09801Inherited


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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0.000000000000002109Direct
SNF-like0.0000000000000539Direct
Neurotransmitter-gated ion-channel transmembrane pore0.0000000000003078Direct
Nicotinic receptor ligand binding domain-like0.0000000000009124Direct
E2F-DP heterodimerization region0.000006163Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.00001984Direct
Voltage-gated potassium channels0.0001145Direct
Insulin-like0.0004651Direct
Spectrin repeat0.0006607Direct
Ankyrin repeat0.001412Inherited
PH domain-like0.002Inherited
SMAD MH1 domain0.002906Inherited
Transducin (heterotrimeric G protein), gamma chain0.002906Inherited
Fibronectin type III0.003766Inherited
SMAD/FHA domain0.01631Inherited
P-loop containing nucleoside triphosphate hydrolases0.03378Inherited
PLP-dependent transferases0.04077Inherited
Homeodomain-like0.07108Inherited
cAMP-binding domain-like0.08155Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
46785,144074
  • 46785 - "Winged helix" DNA-binding domain
  • 144074 - E2F-DP heterodimerization region
  • 0Direct
    47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.000000000000002109Direct
    63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 0.0000000000003078Direct
    48726,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.001433Inherited
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.002256Inherited
    48403,48403
  • 48403 - Ankyrin repeat
  • 48403 - Ankyrin repeat
  • 0.01121Inherited
    47473,47473
  • 47473 - EF-hand
  • 47473 - EF-hand
  • 0.05019Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.003703Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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