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Xenopus ANatomical entity (XAN): ectoderm

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   whole organism [XAO:0003004] <12>(463|595) (466|331|144)
+ + + + 4:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + + 3:   multicellular anatomical structure [XAO:0005002] <4>(437|563) (439|321|141)
+ + + 3:   Xenopus anatomical entity [XAO:0000000] <9>
+ + 2:   embryo [XAO:0000113] <8>(133|185) (135|87|37)
+ + 2:   tissue [XAO:0003040] <186>(180|249) (187|128|57)
+ 1:   primary germ layer [XAO:0003011] <4>(107|153) (108|71|29)
0:   ectoderm [XAO:0000001] <15>(61|84) (61|42|11)
- 1:   epidermis [XAO:0000028] <10>(3|6) (3|2|0)
- 1:   fin [XAO:0000002] <9>(9|8) (9|1|2)
- 1:   neuroectoderm [XAO:0000042] <9>(25|29) (26|14|5)
- 1:   animal cap [XAO:0000036] <2>(1|1) (1|1|0)
- 1:   cranial placode [XAO:0000305] <2>(14|14) (14|6|2)
- 1:   mouth primordium [XAO:0000269] <2>(3|3) (3|0|0)
- 1:   neural plate border [XAO:0004104] <2>(5|6) (6|2|0)
- 1:   non-neural ectoderm [XAO:0004091] <2>(3|3) (3|1|0)
- 1:   hatching gland [XAO:0000034] <1>(0|0) (0|0|0)
- 1:   ectodermal cell [XAO:0003245](0|0) (0|0|0)
- 1:   hypophyseal primordium [XAO:0000267](0|1) (0|0|0)
- 1:   non-involuting marginal zone [XAO:0000253](1|1) (1|2|1)
- 1:   sensorial layer [XAO:0000320](2|2) (2|0|0)
- 1:   stomodeal-hypophyseal primordium [XAO:0000032](3|3) (3|1|0)
- 1:   trunk placode [XAO:0000461](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Nucleoplasmin-like core domain0Direct
TK C-terminal domain-like0Direct
SPOC domain-like0Direct
SMAD MH1 domain0Direct
alpha-catenin/vinculin-like0Direct
14-3-3 protein0Direct
Zn-binding ribosomal proteins0Direct
Subdomain of clathrin and coatomer appendage domain0Direct
PAH2 domain0Direct
Nop domain0Direct
Ribosomal L27 protein-like0Direct
DLC0Direct
E2F-DP heterodimerization region0Direct
Surp module (SWAP domain)0Direct
RBP11-like subunits of RNA polymerase0Direct
Hedgehog/DD-peptidase0Direct
Subunits of heterodimeric actin filament capping protein Capz0Direct
Tim10-like0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
Ribosomal protein L10-like0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
LuxS/MPP-like metallohydrolase0Direct
Uracil-DNA glycosylase-like0Direct
GINS helical bundle-like0Direct
PriA/YqbF domain0Direct
Zn-finger domain of Sec23/240Direct
Synuclein0Direct
Moesin tail domain0Direct
C-terminal domain of adenylylcyclase associated protein0Direct
Ribosomal proteins L15p and L18e0Direct
PLP-binding barrel0Direct
Delta-sleep-inducing peptide immunoreactive peptide0Direct
Alanine racemase C-terminal domain-like0Direct
F1F0 ATP synthase subunit C0Direct
Ribulose-phoshate binding barrel0Direct
Notch domain0Direct
RNA-binding domain, RBD0.000001788Direct
Tubulin C-terminal domain-like0.001227Inherited
Frizzled cysteine-rich domain0.002297Inherited
"Winged helix" DNA-binding domain0.003418Inherited
Homeodomain-like0.003698Inherited
Tubulin nucleotide-binding domain-like0.004049Inherited
HLH, helix-loop-helix DNA-binding domain0.008271Inherited
Orange domain-like0.04313Inherited
Sema domain0.05027Inherited
Snake toxin-like0.05435Inherited
Cytokine0.1304Inherited
Plexin repeat0.1814Inherited
Intermediate filament protein, coiled coil region0.1961Inherited
beta-beta-alpha zinc fingers0.2267Inherited
HMG-box0.2353Inherited
Cyclin-like0.3686Inherited
Kazal-type serine protease inhibitors0.4175Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.5787Inherited
TIMP-like0.653Inherited
lambda repressor-like DNA-binding domains0.736Inherited
Growth factor receptor domain0.743Inherited
p53-like transcription factors0.7597Inherited
Kringle-like0.9245Inherited
Cystine-knot cytokines0.9378Inherited
EGF/Laminin1Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Zn-finger domain of Sec23/240Direct
14-3-3 protein0Direct
SIAH, seven in absentia homolog0Direct
Synuclein0Direct
Ran-binding domain0Direct
Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain0Direct
Alanine racemase-like, N-terminal domain0Direct
Moesin tail domain0Direct
Tim10/DDP0Direct
Branched-chain alpha-keto acid dehydrogenase Pyr module0Direct
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain0Direct
SMAD MH1 domain0Direct
Ubiquitin carboxyl-terminal hydrolase UCH-L0Direct
Noggin0Direct
Prefoldin0Direct
Cell cycle transcription factor e2f-dp0Direct
DLC0Direct
Nop domain0Direct
GDI-like N domain0Direct
Polo-box duplicated region0Direct
NTF2-like0Direct
Surp module (SWAP domain)0Direct
S-adenosylhomocystein hydrolase0Direct
RUNT domain0Direct
P4 origin-binding domain-like0Direct
E2F dimerization segment0Direct
Ferritin0Direct
Helical domain of Sec23/240Direct
SMAD domain0Direct
Delta-sleep-inducing peptide immunoreactive peptide0Direct
MPP-like0Direct
SH3BGR (SH3-binding, glutamic acid-rich protein-like)0Direct
Notch domain0Direct
CAT-like0Direct
HAT/Suf repeat0Direct
TRASH domain0Direct
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain0Direct
Alpha-adaptin ear subdomain-like0Direct
Clathrin adaptor appendage, alpha and beta chain-specific domain0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Eukaryotic ODC-like0Direct
ECR1 N-terminal domain-like0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
Pseudouridine synthase I TruA0Direct
Extracellular domain of cell surface receptors0Direct
NLI interacting factor-like phosphatase0Direct
F1F0 ATP synthase subunit C0Direct
Nucleoplasmin-like core domain0Direct
C-terminal domain of adenylylcyclase associated protein0Direct
alpha-catenin/vinculin0Direct
Branched-chain alpha-keto acid dehydrogenase PP module0Direct
Ribosomal proteins L15p and L18e0Direct
Hedgehog (development protein), N-terminal signaling domain0Direct
PAH2 domain0Direct
Canonical RBD0.00000969Direct
Tubulin, C-terminal domain0.001201Inherited
Tubulin, GTPase domain0.001201Inherited
Frizzled cysteine-rich domain0.002275Inherited
Sema domain0.00618Inherited
HLH, helix-loop-helix DNA-binding domain0.006465Inherited
Homeodomain0.006916Inherited
Forkhead DNA-binding domain0.02522Inherited
Cell cycle control phosphatase, catalytic domain0.03458Inherited
Hairy Orange domain0.03951Inherited
Fibroblast growth factors (FGF)0.1337Inherited
LIM domain0.1504Inherited
Classic zinc finger, C2H20.1568Inherited
Plexin repeat0.1843Inherited
Arginine methyltransferase0.1897Inherited
Intermediate filament protein, coiled coil region0.2021Inherited
HMG-box0.2116Inherited
POU-specific domain0.2206Inherited
Ephrin receptor ligand binding domain0.2323Inherited
Glutathione peroxidase-like0.2567Inherited
Cyclin0.259Inherited
Ovomucoid domain III-like0.4066Inherited
Growth factor receptor domain0.4731Inherited
ets domain0.5532Inherited
Multidrug efflux transporter AcrB transmembrane domain0.6365Inherited
Transforming growth factor (TGF)-beta0.7244Inherited
Paired domain0.7405Inherited
T-box0.9835Inherited
Calmodulin-like1Inherited
Kringle modules1Inherited


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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Moesin tail domain0Direct
Tim10-like0Direct
Notch domain0Direct
Zn-binding ribosomal proteins0Direct
F1F0 ATP synthase subunit C0Direct
Ribosomal proteins L15p and L18e0Direct
Subunits of heterodimeric actin filament capping protein Capz0Direct
Ribulose-phoshate binding barrel0Direct
PriA/YqbF domain0Direct
Delta-sleep-inducing peptide immunoreactive peptide0Direct
Surp module (SWAP domain)0Direct
Nucleoplasmin-like core domain0Direct
LuxS/MPP-like metallohydrolase0Direct
Uracil-DNA glycosylase-like0Direct
Synuclein0Direct
SPOC domain-like0Direct
Subdomain of clathrin and coatomer appendage domain0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
Alanine racemase C-terminal domain-like0Direct
GINS helical bundle-like0Direct
Hedgehog/DD-peptidase0Direct
Zn-finger domain of Sec23/240Direct
SMAD MH1 domain0Direct
Nop domain0Direct
Ribosomal L27 protein-like0Direct
PLP-binding barrel0Direct
RBP11-like subunits of RNA polymerase0Direct
14-3-3 protein0Direct
E2F-DP heterodimerization region0Direct
TK C-terminal domain-like0Direct
Ribosomal protein L10-like0Direct
DLC0Direct
PAH2 domain0Direct
C-terminal domain of adenylylcyclase associated protein0Direct
alpha-catenin/vinculin-like0Direct
RNA-binding domain, RBD0.000001279Direct
Tubulin C-terminal domain-like0.000936Direct
Frizzled cysteine-rich domain0.001767Inherited
"Winged helix" DNA-binding domain0.002637Inherited
Homeodomain-like0.002857Inherited
Tubulin nucleotide-binding domain-like0.003136Inherited
HLH, helix-loop-helix DNA-binding domain0.006479Inherited
Orange domain-like0.03528Inherited
Sema domain0.04129Inherited
Snake toxin-like0.04473Inherited
Cytokine0.1127Inherited
Plexin repeat0.1592Inherited
Intermediate filament protein, coiled coil region0.1729Inherited
beta-beta-alpha zinc fingers0.2018Inherited
HMG-box0.2101Inherited
Cyclin-like0.3377Inherited
Kazal-type serine protease inhibitors0.3855Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.5428Inherited
TIMP-like0.6179Inherited
lambda repressor-like DNA-binding domains0.7018Inherited
Growth factor receptor domain0.7089Inherited
p53-like transcription factors0.7256Inherited
Kringle-like0.8966Inherited
Cystine-knot cytokines0.9096Inherited
EGF/Laminin1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54534,54534
  • 54534 - FKBP-like
  • 54534 - FKBP-like
  • 0Direct
    53223,51735
  • 53223 - Aminoacid dehydrogenase-like, N-terminal domain
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 0Direct
    63411,63411
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
  • 0Direct
    52518,52518
  • 52518 - Thiamin diphosphate-binding fold (THDP-binding)
  • 52518 - Thiamin diphosphate-binding fold (THDP-binding)
  • 0Direct
    47095,47095
  • 47095 - HMG-box
  • 47095 - HMG-box
  • 0Direct
    110324,50249
  • 110324 - Ribosomal L27 protein-like
  • 50249 - Nucleic acid-binding proteins
  • 0Direct
    52540,47917
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct
    52540,53254
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 53254 - Phosphoglycerate mutase-like
  • 0Direct
    47220,47220
  • 47220 - alpha-catenin/vinculin-like
  • 47220 - alpha-catenin/vinculin-like
  • 0Direct
    47005,52777
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 52777 - CoA-dependent acyltransferases
  • 0Direct
    51419,50621
  • 51419 - PLP-binding barrel
  • 50621 - Alanine racemase C-terminal domain-like
  • 0Direct
    48371,46785
  • 48371 - ARM repeat
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    57184,100895
  • 57184 - Growth factor receptor domain
  • 100895 - Kazal-type serine protease inhibitors
  • 0Direct
    82615,82615
  • 82615 - Polo-box domain
  • 82615 - Polo-box domain
  • 0Direct
    49348,55711
  • 49348 - Clathrin adaptor appendage domain
  • 55711 - Subdomain of clathrin and coatomer appendage domain
  • 0Direct
    57196,90193
  • 57196 - EGF/Laminin
  • 90193 - Notch domain
  • 0Direct
    52518,52922
  • 52518 - Thiamin diphosphate-binding fold (THDP-binding)
  • 52922 - TK C-terminal domain-like
  • 0Direct
    46785,144074
  • 46785 - "Winged helix" DNA-binding domain
  • 144074 - E2F-DP heterodimerization region
  • 0Direct
    82919,53300
  • 82919 - Zn-finger domain of Sec23/24
  • 53300 - vWA-like
  • 0Direct
    57756,57756
  • 57756 - Retrovirus zinc finger-like domains
  • 57756 - Retrovirus zinc finger-like domains
  • 0Direct
    52540,46785
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    51230,47005
  • 51230 - Single hybrid motif
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 0Direct
    57184,49265
  • 57184 - Growth factor receptor domain
  • 49265 - Fibronectin type III
  • 0Direct
    54928,54928
  • 54928 - RNA-binding domain, RBD
  • 54928 - RNA-binding domain, RBD
  • 0.0008707Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.000936Direct
    103575,48726
  • 103575 - Plexin repeat
  • 48726 - Immunoglobulin
  • 0.01583Inherited
    57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.02524Inherited
    47459,158457
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 158457 - Orange domain-like
  • 0.03528Inherited
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.03966Inherited
    101912,103575
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 0.04129Inherited
    63501,50242
  • 63501 - Frizzled cysteine-rich domain
  • 50242 - TIMP-like
  • 0.06092Inherited
    50729,56112
  • 50729 - PH domain-like
  • 56112 - Protein kinase-like (PK-like)
  • 0.06092Inherited
    57603,57603
  • 57603 - FnI-like domain
  • 57603 - FnI-like domain
  • 0.06209Inherited
    64593,64593
  • 64593 - Intermediate filament protein, coiled coil region
  • 64593 - Intermediate filament protein, coiled coil region
  • 0.1154Inherited
    57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.1831Inherited
    55550,56112
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.2187Inherited
    57440,57440
  • 57440 - Kringle-like
  • 57440 - Kringle-like
  • 0.3223Inherited
    56112,47769
  • 56112 - Protein kinase-like (PK-like)
  • 47769 - SAM/Pointed domain
  • 0.3223Inherited
    47413,46689
  • 47413 - lambda repressor-like DNA-binding domains
  • 46689 - Homeodomain-like
  • 0.5593Inherited
    50044,55550
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 0.6602Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.8431Inherited
    81383,52047
  • 81383 - F-box domain
  • 52047 - RNI-like
  • 0.8502Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    47220,47220,47220
  • 47220 - alpha-catenin/vinculin-like
  • 47220 - alpha-catenin/vinculin-like
  • 47220 - alpha-catenin/vinculin-like
  • 0Direct
    57184,52058,57184
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0Direct
    51230,47005,52777
  • 51230 - Single hybrid motif
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 52777 - CoA-dependent acyltransferases
  • 0Direct
    54791,54791,54791
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 0Direct
    50249,50249,50249
  • 50249 - Nucleic acid-binding proteins
  • 50249 - Nucleic acid-binding proteins
  • 50249 - Nucleic acid-binding proteins
  • 0Direct
    101912,103575,48726
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 48726 - Immunoglobulin
  • 0.01583Inherited
    57196,57196,57184
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.01938Inherited
    50044,55550,56112
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.08869Inherited
    48371,48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.4745Inherited
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.7572Inherited
    49313,49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.9308Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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