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Xenopus ANatomical entity (XAN): midbrain-hindbrain boundary

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   embryo [XAO:0000113] <8>(133|185) (135|87|37)
+ + + + + 5:   anatomical group [XAO:0003001] <2>(418|530) (420|307|132)
+ + + + 4:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + + + 4:   anatomical region [XAO:0003186] <51>(373|484) (374|284|122)
+ + + + 4:   whole organism [XAO:0003004] <12>(463|595) (466|331|144)
+ + + + 4:   anatomical system [XAO:0003002] <19>(285|379) (290|203|91)
+ + + + 4:   primary germ layer [XAO:0003011] <4>(107|153) (108|71|29)
+ + + 3:   ectoderm [XAO:0000001] <15>(61|84) (61|42|11)
+ + + 3:   nervous system [XAO:0000177] <11>(134|200) (140|112|51)
+ + + 3:   multicellular anatomical structure [XAO:0005002] <4>(437|563) (439|321|141)
+ + + 3:   organism subdivision [XAO:0003013] <11>(378|498) (381|291|125)
+ + + 3:   head region [XAO:0000040] <4>(179|247) (182|139|57)
+ + + 3:   compound organ [XAO:0003041] <8>(335|444) (336|275|123)
+ + 2:   Xenopus anatomical entity [XAO:0000000] <9>
+ + 2:   cavitated compound organ [XAO:0003165] <21>(287|393) (290|247|112)
+ + 2:   neuroectoderm [XAO:0000042] <9>(25|29) (26|14|5)
+ + 2:   central nervous system [XAO:0000215] <7>(129|190) (132|107|47)
+ + 2:   tissue [XAO:0003040] <186>(180|249) (187|128|57)
+ + 2:   head [XAO:0003024] <22>(179|246) (182|139|57)
+ 1:   anatomical line [XAO:0004003] <4>(6|5) (6|2|1)
+ 1:   neural plate [XAO:0000249] <10>(18|18) (18|7|3)
+ 1:   brain [XAO:0000010] <14>(78|120) (78|64|28)
0:   midbrain-hindbrain boundary [XAO:0000016] <1>(4|5) (4|1|1)
- 1:   isthmic nucleus [XAO:0004557](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain-like0.00000014Direct
GINS helical bundle-like0.00004648Direct
HMG-box0.00008899Direct
Frizzled cysteine-rich domain0.0001847Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain0.000001502Direct
Paired domain0.00001389Direct
HMG-box0.0001066Direct
Frizzled cysteine-rich domain0.0001969Direct
Sema domain0.0008878Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Homeodomain-like0.00000009907Direct
GINS helical bundle-like0.00003409Direct
HMG-box0.00006576Direct
Frizzled cysteine-rich domain0.0001377Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
103575,48726
  • 103575 - Plexin repeat
  • 48726 - Immunoglobulin
  • 0.0001722Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    101912,103575,48726
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 48726 - Immunoglobulin
  • 0.0001722Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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