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Xenopus ANatomical entity (XAN): skin

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + + 4:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + + + 4:   whole organism [XAO:0003004] <12>(463|595) (466|331|144)
+ + + 3:   multicellular anatomical structure [XAO:0005002] <4>(437|563) (439|321|141)
+ + + 3:   anatomical group [XAO:0003001] <2>(418|530) (420|307|132)
+ + 2:   anatomical system [XAO:0003002] <19>(285|379) (290|203|91)
+ + 2:   organism subdivision [XAO:0003013] <11>(378|498) (381|291|125)
+ 1:   dermal system [XAO:0000176] <1>(13|15) (14|7|3)
+ 1:   surface structure [XAO:0003028] <14>(23|28) (25|11|5)
0:   skin [XAO:0000023] <7>(11|14) (12|7|3)
- 1:   epidermis [XAO:0000028] <10>(3|6) (3|2|0)
- 1:   dermis [XAO:0000217] <3>(0|0) (0|0|0)
- 1:   pigment cell [XAO:0003014] <3>(2|2) (2|0|0)
- 1:   skin gland [XAO:0005071] <3>(0|0) (0|0|0)
- 1:   goblet cell [XAO:0004392](0|0) (0|0|0)
- 1:   neuromast mantle cell [XAO:0003258](0|0) (0|0|0)
- 1:   neuromast support cell [XAO:0003259](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
14-3-3 protein0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
GroEL-intermediate domain like0.0002186Direct
GroEL equatorial domain-like0.0002186Direct
Plakin repeat0.000332Direct
GroEL apical domain-like0.0006129Direct
Intermediate filament protein, coiled coil region0.002574Inherited
Tubulin C-terminal domain-like0.04551Inherited
Tubulin nucleotide-binding domain-like0.04551Inherited
Family A G protein-coupled receptor-like1Inherited
HLH, helix-loop-helix DNA-binding domain1Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
14-3-3 protein0Direct
Ferritin0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Glutathione S-transferase (GST), N-terminal domain0.000005006Direct
Proteasome subunits0.00008635Direct
Plakin repeat0.0003027Direct
Intermediate filament protein, coiled coil region0.00181Inherited
Multidrug efflux transporter AcrB transmembrane domain0.01975Inherited
Tubulin, C-terminal domain0.03556Inherited
Tubulin, GTPase domain0.03556Inherited
Calmodulin-like0.1368Inherited
Forkhead DNA-binding domain1Inherited
HLH, helix-loop-helix DNA-binding domain1Inherited
Rhodopsin-like1Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
14-3-3 protein0Direct
GroEL equatorial domain-like0.0001633Direct
GroEL-intermediate domain like0.0001633Direct
Plakin repeat0.0002493Direct
GroEL apical domain-like0.0004636Direct
BPTI-like0.0008419Direct
Intermediate filament protein, coiled coil region0.001985Inherited
Tubulin C-terminal domain-like0.0373Inherited
Tubulin nucleotide-binding domain-like0.0373Inherited
HLH, helix-loop-helix DNA-binding domain1Inherited
Family A G protein-coupled receptor-like1Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
52540,47917
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct
    64593,64593
  • 64593 - Intermediate filament protein, coiled coil region
  • 64593 - Intermediate filament protein, coiled coil region
  • 0Direct
    52833,47616
  • 52833 - Thioredoxin-like
  • 47616 - GST C-terminal domain-like
  • 0.0000278Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.0002493Direct
    46966,47473
  • 46966 - Spectrin repeat
  • 47473 - EF-hand
  • 0.0002794Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0008419Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.0373Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0002493Direct
    46966,46966,47473
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 47473 - EF-hand
  • 0.0002794Direct
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.0005421Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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