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Xenopus ANatomical entity (XAN): liver

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + + 4:   anatomical region [XAO:0003186] <51>(374|484) (375|284|123)
+ + + + 4:   anatomical structure [XAO:0003000] <11>(576|729) (576|397|162)
+ + + + 4:   whole organism [XAO:0003004] <12>(464|596) (467|333|144)
+ + + 3:   trunk region [XAO:0000054] <1>(217|300) (217|157|82)
+ + + 3:   anatomical group [XAO:0003001] <2>(419|531) (421|308|133)
+ + + 3:   organism subdivision [XAO:0003013] <11>(379|498) (382|291|126)
+ + + 3:   multicellular anatomical structure [XAO:0005002] <4>(438|563) (440|323|141)
+ + 2:   compound organ [XAO:0003041] <8>(336|444) (337|275|124)
+ + 2:   anatomical system [XAO:0003002] <19>(286|380) (291|204|92)
+ + 2:   trunk [XAO:0003025] <10>(216|299) (216|157|82)
+ + 2:   alimentary system [XAO:0000125] <30>(64|97) (65|46|19)
+ + 2:   anatomical cluster [XAO:0003160] <43>(94|140) (96|75|38)
+ 1:   liver and biliary system [XAO:0000132] <5>(8|15) (10|12|4)
+ 1:   viscus [XAO:0003034] <9>(64|95) (66|45|21)
+ 1:   solid compound organ [XAO:0003164] <3>(23|34) (24|20|9)
0:   liver [XAO:0000133] <3>(6|12) (7|11|4)
- 1:   capillary system of liver [XAO:0000377](0|0) (0|0|0)
- 1:   hepatocyte [XAO:0005022](0|0) (0|0|0)
- 1:   liver parenchyme [XAO:0000454](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Fibrinogen coiled-coil and central regions0Direct
Surp module (SWAP domain)0Direct
TK C-terminal domain-like0Direct
Succinyl-CoA synthetase domains0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
Subunits of heterodimeric actin filament capping protein Capz0Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Variant RING domain0Direct
Fibronectin type I module0Direct
CAT-like0Direct
Branched-chain alpha-keto acid dehydrogenase PP module0Direct
Succinyl-CoA synthetase domains0Direct
Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain0Direct
Fibrinogen coiled-coil and central regions0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
Surp module (SWAP domain)0Direct
HCDH C-domain-like0Direct
Ferritin0Direct
Complement components0.0003074Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Subunits of heterodimeric actin filament capping protein Capz0Direct
TK C-terminal domain-like0Direct
Surp module (SWAP domain)0Direct
Succinyl-CoA synthetase domains0Direct
Fibrinogen coiled-coil and central regions0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
Alpha-macroglobulin receptor domain0.0009348Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
81995,81811
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
  • 0Direct
    57196,50494
  • 57196 - EGF/Laminin
  • 50494 - Trypsin-like serine proteases
  • 0Direct
    82895,57424
  • 82895 - TSP-1 type 1 repeat
  • 57424 - LDL receptor-like module
  • 0Direct
    56059,52210
  • 56059 - Glutathione synthetase ATP-binding domain-like
  • 52210 - Succinyl-CoA synthetase domains
  • 0Direct
    52518,52922
  • 52518 - Thiamin diphosphate-binding fold (THDP-binding)
  • 52922 - TK C-terminal domain-like
  • 0Direct
    57603,57440
  • 57603 - FnI-like domain
  • 57440 - Kringle-like
  • 0Direct
    51230,47005
  • 51230 - Single hybrid motif
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 0Direct
    47005,52777
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 52777 - CoA-dependent acyltransferases
  • 0Direct
    54403,54403
  • 54403 - Cystatin/monellin
  • 54403 - Cystatin/monellin
  • 0Direct
    53300,81995
  • 53300 - vWA-like
  • 81995 - beta-sandwich domain of Sec23/24
  • 0Direct
    48371,46785
  • 48371 - ARM repeat
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    81995,81811,82754
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
  • 0Direct
    53300,81995,81811
  • 53300 - vWA-like
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
  • 0Direct
    57196,49854,57535
  • 57196 - EGF/Laminin
  • 49854 - Spermadhesin, CUB domain
  • 57535 - Complement control module/SCR domain
  • 0Direct
    51230,47005,52777
  • 51230 - Single hybrid motif
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 52777 - CoA-dependent acyltransferases
  • 0Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)