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Xenopus ANatomical entity (XAN): blastopore

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Xenopus anatomical entity [XAO:0000000] <9>
+ + 2:   whole organism [XAO:0003004] <12>(463|595) (466|331|144)
+ + 2:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + 2:   embryo [XAO:0000113] <8>(133|185) (135|87|37)
+ 1:   vegetal yolk mass [XAO:0000281] <3>(3|5) (3|2|0)
+ 1:   marginal zone [XAO:0000068] <8>(8|12) (8|7|3)
+ 1:   embryonic structure [XAO:0003042] <58>(42|54) (44|27|13)
0:   blastopore [XAO:0000208] <1>(3|5) (3|2|0)
- 1:   blastopore lip [XAO:0000078] <2>(3|5) (3|2|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
RNA-binding domain, RBD0.00013Direct
HMG-box0.0905Inherited
p53-like transcription factors0.917Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Canonical RBD0.00003503Direct
Tandem AAA-ATPase domain0.0008028Direct
Eukaryotic type KH-domain (KH-domain type I)0.001462Inherited
HMG-box0.06509Inherited
T-box0.582Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
RNA-binding domain, RBD0.00009637Direct
HMG-box0.07611Inherited
p53-like transcription factors0.889Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
90209,90209
  • 90209 - Ran binding protein zinc finger-like
  • 90209 - Ran binding protein zinc finger-like
  • 0.0003477Direct
    52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0008529Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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