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Xenopus ANatomical entity (XAN): lateral plate mesoderm

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   multicellular anatomical structure [XAO:0005002] <4>(437|563) (439|321|141)
+ + + 3:   tissue [XAO:0003040] <186>(180|249) (187|128|57)
+ + + 3:   Xenopus anatomical entity [XAO:0000000] <9>
+ + 2:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + 2:   whole organism [XAO:0003004] <12>(463|595) (466|331|144)
+ + 2:   primary germ layer [XAO:0003011] <4>(107|153) (108|71|29)
+ + 2:   embryo [XAO:0000113] <8>(133|185) (135|87|37)
+ 1:   embryonic structure [XAO:0003042] <58>(42|54) (44|27|13)
+ 1:   mesoderm [XAO:0000050] <9>(28|38) (28|11|7)
0:   lateral plate mesoderm [XAO:0000311] <6>(9|11) (9|3|1)
- 1:   anterior dorsal lateral plate region [XAO:0003051] <1>(4|4) (4|1|0)
- 1:   filter chamber [XAO:0000439] <1>(0|0) (0|0|0)
- 1:   dorsal lateral plate mesoderm [XAO:0004509](0|1) (1|0|0)
- 1:   somatic layer of lateral plate mesoderm [XAO:0000271](0|0) (0|0|0)
- 1:   splanchnic layer of lateral plate mesoderm [XAO:0000276](1|1) (1|1|1)
- 1:   ventral mesoderm [XAO:0004473](2|2) (2|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Frizzled cysteine-rich domain0.0001054Direct
Snake toxin-like0.0001487Direct
Orange domain-like0.0008689Direct
Globin-like0.001301Inherited
beta-beta-alpha zinc fingers0.008862Inherited
GroEL-intermediate domain like0.01085Inherited
GroEL equatorial domain-like0.01085Inherited
GroEL apical domain-like0.01085Inherited
Cystine-knot cytokines0.0267Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Erythroid transcription factor GATA-10.000002024Direct
ets domain0.000048Direct
Frizzled cysteine-rich domain0.0001121Direct
Extracellular domain of cell surface receptors0.0001438Direct
Pointed domain0.0007686Direct
Hairy Orange domain0.0008127Direct
Globins0.001402Inherited
Group II chaperonin (CCT, TRIC), apical domain0.003618Inherited
Classic zinc finger, C2H20.003643Inherited
Group II chaperonin (CCT, TRIC), intermediate domain0.003943Inherited
Transforming growth factor (TGF)-beta0.0136Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Frizzled cysteine-rich domain0.00007801Direct
Snake toxin-like0.0001105Direct
Orange domain-like0.0006592Direct
Globin-like0.0009928Direct
beta-beta-alpha zinc fingers0.006946Inherited
GroEL equatorial domain-like0.008528Inherited
GroEL apical domain-like0.008528Inherited
GroEL-intermediate domain like0.008528Inherited
Cystine-knot cytokines0.02141Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.0004156Direct
    47459,158457
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 158457 - Orange domain-like
  • 0.0006592Direct
    57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.001155Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57667,57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.08245Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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