SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Xenopus ANatomical entity (XAN): connective tissue

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   whole organism [XAO:0003004] <12>(463|595) (466|331|144)
+ + + 3:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + 2:   multicellular anatomical structure [XAO:0005002] <4>(437|563) (439|321|141)
+ 1:   tissue [XAO:0003040] <186>(180|249) (187|128|57)
0:   connective tissue [XAO:0001017] <9>(10|8) (11|2|0)
- 1:   skeletal tissue [XAO:0004038] <5>(10|8) (11|2|0)
- 1:   dense regular connective tissue [XAO:0004030] <2>(0|0) (0|0|0)
- 1:   periosteum [XAO:0004503] <2>(0|0) (0|0|0)
- 1:   perichondrium [XAO:0004049] <1>(0|0) (0|0|0)
- 1:   stromal cell [XAO:0005020] <1>(0|0) (0|0|0)
- 1:   perichordal tissue [XAO:0004050](0|0) (0|0|0)
- 1:   periosteum (sensu fibrous layer) [XAO:0004504](0|0) (0|0|0)
- 1:   periosteum (sensu osteogenic layer) [XAO:0004505](0|0) (0|0|0)
- 1:   vacuolated notochordal tissue [XAO:0004054](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Subunits of heterodimeric actin filament capping protein Capz0Direct
F1F0 ATP synthase subunit C0Direct
Thioredoxin-like0.0004199Direct
LDH C-terminal domain-like0.0005873Direct
Actin depolymerizing proteins0.0006407Direct
Zn-binding ribosomal proteins0.0007706Direct
Annexin0.001113Inherited
Translation proteins SH3-like domain0.003081Inherited
p53-like transcription factors0.6018Inherited
Homeodomain-like1Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
DJ-1/PfpI0Direct
RUNT domain0Direct
F1F0 ATP synthase subunit C0Direct
Linker histone H1/H50.0005988Direct
LDH N-terminal domain-like0.0005988Direct
Lactate & malate dehydrogenases, C-terminal domain0.0005988Direct
Glutathione peroxidase-like0.003204Inherited
Homeodomain1Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
F1F0 ATP synthase subunit C0Direct
Subunits of heterodimeric actin filament capping protein Capz0Direct
Thioredoxin-like0.0003162Direct
LDH C-terminal domain-like0.0004441Direct
Actin depolymerizing proteins0.0004846Direct
Zn-binding ribosomal proteins0.0005839Direct
Annexin0.0008475Direct
Translation proteins SH3-like domain0.002379Inherited
UBC-like0.01085Inherited
p53-like transcription factors0.5666Inherited
Homeodomain-like1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
51735,56327
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 56327 - LDH C-terminal domain-like
  • 0.0004441Direct
    47095,47095
  • 47095 - HMG-box
  • 47095 - HMG-box
  • 0.002409Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)