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Xenopus ANatomical entity (XAN): epithelium

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   whole organism [XAO:0003004] <12>(463|595) (466|331|144)
+ + + 3:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + 2:   multicellular anatomical structure [XAO:0005002] <4>(437|563) (439|321|141)
+ 1:   tissue [XAO:0003040] <186>(180|249) (187|128|57)
0:   epithelium [XAO:0003045] <23>(14|19) (15|6|3)
- 1:   epithelial cell [XAO:0003249] <9>(4|5) (4|2|1)
- 1:   gut epithelium [XAO:0003200] <4>(1|0) (1|0|0)
- 1:   unilaminar epithelium [XAO:0004007] <4>(0|1) (0|0|0)
- 1:   olfactory epithelium [XAO:0005024] <2>(1|2) (2|1|0)
- 1:   multilaminar epithelium [XAO:0004006] <1>(3|3) (3|0|0)
- 1:   non-ciliated epithelial cell [XAO:0004225] <1>(0|0) (0|0|0)
- 1:   arterial endothelium [XAO:0000357](0|0) (0|0|0)
- 1:   atypical epithelium [XAO:0004004](0|0) (0|0|0)
- 1:   basal lamina [XAO:0003163](0|0) (0|0|0)
- 1:   coelomic epithelium [XAO:0000329](0|0) (0|0|0)
- 1:   dental epithelium [XAO:0003203](0|0) (0|0|0)
- 1:   epidermis outer layer [XAO:0000029](0|0) (0|0|0)
- 1:   esophageal epithelium [XAO:0005299](0|0) (0|0|0)
- 1:   intersomitic epithelium [XAO:0004077](0|0) (0|0|0)
- 1:   lens epithelium [XAO:0004094](0|0) (0|0|0)
- 1:   mesentery [XAO:0000138](0|0) (0|0|0)
- 1:   mucociliary epithelium [XAO:0004393](0|0) (0|0|0)
- 1:   notochordal epithelium [XAO:0001021](0|0) (0|0|0)
- 1:   oral epithelium [XAO:0003201](0|0) (0|0|0)
- 1:   pulmonary epithelium [XAO:0005124](0|0) (0|0|0)
- 1:   retinal pigmented epithelium [XAO:0003217](2|1) (2|0|0)
- 1:   tracheal epithelium [XAO:0005298](0|0) (0|0|0)
- 1:   transporting epithelium [XAO:0004224](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Hedgehog/DD-peptidase0Direct
HLH, helix-loop-helix DNA-binding domain0.000000002587Direct
Homeodomain-like0.0000002832Direct
Tubulin C-terminal domain-like0.000001159Direct
Tubulin nucleotide-binding domain-like0.000001159Direct
Kringle-like0.00005711Direct
alpha-catenin/vinculin-like0.0001142Direct
TSP type-3 repeat0.0001142Direct
SRF-like0.0001142Direct
Intermediate filament protein, coiled coil region0.0002215Direct
Tropomyosin0.004141Inherited
Transducin (alpha subunit), insertion domain0.01864Inherited
FnI-like domain0.02202Inherited
Spectrin repeat0.02733Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
alpha-catenin/vinculin0Direct
Hedgehog (development protein), N-terminal signaling domain0Direct
HLH, helix-loop-helix DNA-binding domain0.000000005972Direct
Homeodomain0.0000002796Direct
Tubulin, C-terminal domain0.000001407Direct
Tubulin, GTPase domain0.000001407Direct
TSP type-3 repeat0.0001075Direct
SRF-like0.0001075Direct
Thrombospondin C-terminal domain0.0001075Direct
Intermediate filament protein, coiled coil region0.0002986Direct
Paired domain0.0003428Direct
Fibronectin type II module0.0008224Direct
Forkhead DNA-binding domain0.002176Inherited
Tropomyosin0.002368Inherited
ets domain0.002948Inherited
Spectrin repeat0.01342Inherited
Transducin (alpha subunit), insertion domain0.01806Inherited
Calmodulin-like0.06175Inherited
G proteins0.8774Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Hedgehog/DD-peptidase0Direct
HLH, helix-loop-helix DNA-binding domain0.000000001815Direct
Homeodomain-like0.0000002008Direct
Tubulin C-terminal domain-like0.0000008271Direct
Tubulin nucleotide-binding domain-like0.0000008271Direct
Kringle-like0.000042Direct
SRF-like0.00008451Direct
TSP type-3 repeat0.00008451Direct
alpha-catenin/vinculin-like0.00008451Direct
Intermediate filament protein, coiled coil region0.0001655Direct
Tropomyosin0.003207Inherited
Transducin (alpha subunit), insertion domain0.01479Inherited
FnI-like domain0.01755Inherited
Spectrin repeat0.02194Inherited
P-loop containing nucleoside triphosphate hydrolases0.8632Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
103647,103647
  • 103647 - TSP type-3 repeat
  • 103647 - TSP type-3 repeat
  • 0Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.0000008271Direct
    103647,49899
  • 103647 - TSP type-3 repeat
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0.00008451Direct
    47220,47220
  • 47220 - alpha-catenin/vinculin-like
  • 47220 - alpha-catenin/vinculin-like
  • 0.00008451Direct
    47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.01479Inherited
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.04312Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    103647,103647,49899
  • 103647 - TSP type-3 repeat
  • 103647 - TSP type-3 repeat
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0Direct
    103647,103647,103647
  • 103647 - TSP type-3 repeat
  • 103647 - TSP type-3 repeat
  • 103647 - TSP type-3 repeat
  • 0Direct
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.01479Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)