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Xenopus ANatomical entity (XAN): skeletal element

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + + 4:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + + + 4:   whole organism [XAO:0003004] <12>(463|595) (466|331|144)
+ + + 3:   multicellular anatomical structure [XAO:0005002] <4>(437|563) (439|321|141)
+ + + 3:   anatomical system [XAO:0003002] <19>(285|379) (290|203|91)
+ + + 3:   anatomical group [XAO:0003001] <2>(418|530) (420|307|132)
+ + + 3:   musculoskeletal system [XAO:0000168] <2>(43|60) (46|26|15)
+ + 2:   anatomical cluster [XAO:0003160] <43>(93|140) (96|75|38)
+ + 2:   compound organ [XAO:0003041] <8>(335|444) (336|275|123)
+ + 2:   skeletal system [XAO:0003060] <3>(16|18) (17|7|4)
+ 1:   solid compound organ [XAO:0003164] <3>(22|34) (25|20|9)
+ 1:   skeleton [XAO:0004053] <3>(12|9) (13|4|2)
0:   skeletal element [XAO:0004012] <8>(11|9) (12|4|2)
- 1:   cartilage element [XAO:0004013] <36>(2|2) (2|0|0)
- 1:   bone element [XAO:0004276] <9>(9|7) (10|4|2)
- 1:   skeletal tissue [XAO:0004038] <5>(10|8) (11|2|0)
- 1:   ossicle [XAO:0004193] <3>(0|0) (0|0|0)
- 1:   regenerating skeletal element [XAO:0004016] <1>(0|0) (0|0|0)
- 1:   vertebral element [XAO:0004288] <1>(0|0) (0|0|0)
- 1:   tooth [XAO:0000431](0|0) (0|0|0)
- 1:   vertebral centrum [XAO:0004287](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Subunits of heterodimeric actin filament capping protein Capz0Direct
F1F0 ATP synthase subunit C0Direct
Zn-binding ribosomal proteins0.0001022Direct
Translation proteins SH3-like domain0.0002648Direct
LDH C-terminal domain-like0.0005991Direct
Actin depolymerizing proteins0.001869Inherited
Thioredoxin-like0.007006Inherited
Spectrin repeat0.01081Inherited
Annexin0.09329Inherited
p53-like transcription factors0.2834Inherited
Homeodomain-like1Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
DJ-1/PfpI0Direct
RUNT domain0Direct
F1F0 ATP synthase subunit C0Direct
Linker histone H1/H50.0006145Direct
LDH N-terminal domain-like0.0006145Direct
Lactate & malate dehydrogenases, C-terminal domain0.0006145Direct
Glutathione peroxidase-like0.01281Inherited
Spectrin repeat0.01828Inherited
Homeodomain1Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
F1F0 ATP synthase subunit C0Direct
Subunits of heterodimeric actin filament capping protein Capz0Direct
Zn-binding ribosomal proteins0.00007562Direct
Translation proteins SH3-like domain0.0001983Direct
LDH C-terminal domain-like0.000453Direct
Actin depolymerizing proteins0.001434Inherited
Thioredoxin-like0.00548Inherited
Spectrin repeat0.008498Inherited
Annexin0.07869Inherited
UBC-like0.1011Inherited
p53-like transcription factors0.2556Inherited
Homeodomain-like1Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47095,47095
  • 47095 - HMG-box
  • 47095 - HMG-box
  • 0.000453Direct
    51735,56327
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 56327 - LDH C-terminal domain-like
  • 0.000453Direct
    46966,47473
  • 46966 - Spectrin repeat
  • 47473 - EF-hand
  • 0.000453Direct
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.0152Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    46966,46966,47473
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 47473 - EF-hand
  • 0.000453Direct
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.005599Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)