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Xenopus ANatomical entity (XAN): skeletal tissue

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + + 4:   anatomical system [XAO:0003002] <19>(285|379) (290|203|91)
+ + + + 4:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + + + 4:   whole organism [XAO:0003004] <12>(463|595) (466|331|144)
+ + + + 4:   anatomical group [XAO:0003001] <2>(418|530) (420|307|132)
+ + + + 4:   musculoskeletal system [XAO:0000168] <2>(43|60) (46|26|15)
+ + + 3:   compound organ [XAO:0003041] <8>(335|444) (336|275|123)
+ + + 3:   skeletal system [XAO:0003060] <3>(16|18) (17|7|4)
+ + + 3:   anatomical cluster [XAO:0003160] <43>(93|140) (96|75|38)
+ + + 3:   multicellular anatomical structure [XAO:0005002] <4>(437|563) (439|321|141)
+ + 2:   tissue [XAO:0003040] <186>(180|249) (187|128|57)
+ + 2:   skeleton [XAO:0004053] <3>(12|9) (13|4|2)
+ + 2:   solid compound organ [XAO:0003164] <3>(22|34) (25|20|9)
+ 1:   connective tissue [XAO:0001017] <9>(10|8) (11|2|0)
+ 1:   skeletal element [XAO:0004012] <8>(11|9) (12|4|2)
0:   skeletal tissue [XAO:0004038] <5>(10|8) (11|2|0)
- 1:   odontoid tissue [XAO:0004046] <8>(0|0) (0|0|0)
- 1:   cartilage tissue [XAO:0000170] <5>(2|2) (2|0|0)
- 1:   bone tissue [XAO:0000169] <3>(8|6) (9|2|0)
- 1:   mineralized tissue [XAO:0004039] <2>(0|0) (0|0|0)
- 1:   non-mineralized chondroid tissue [XAO:0004200](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Subunits of heterodimeric actin filament capping protein Capz0Direct
F1F0 ATP synthase subunit C0Direct
Thioredoxin-like0.00001817Direct
Zn-binding ribosomal proteins0.00009429Direct
Actin depolymerizing proteins0.00009926Direct
Translation proteins SH3-like domain0.0002394Direct
LDH C-terminal domain-like0.0005608Direct
Annexin0.001048Inherited
p53-like transcription factors1Inherited
Homeodomain-like1Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
DJ-1/PfpI0Direct
RUNT domain0Direct
F1F0 ATP synthase subunit C0Direct
Linker histone H1/H50.0005703Direct
LDH N-terminal domain-like0.0005703Direct
Lactate & malate dehydrogenases, C-terminal domain0.0005703Direct
Glutathione peroxidase-like0.000695Direct
Homeodomain1Inherited


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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
F1F0 ATP synthase subunit C0Direct
Subunits of heterodimeric actin filament capping protein Capz0Direct
Thioredoxin-like0.00001321Direct
Zn-binding ribosomal proteins0.00006971Direct
Actin depolymerizing proteins0.0000734Direct
Translation proteins SH3-like domain0.000179Direct
LDH C-terminal domain-like0.0004237Direct
Annexin0.0007974Direct
UBC-like0.0009106Direct
p53-like transcription factors0.9887Inherited
Homeodomain-like1Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47095,47095
  • 47095 - HMG-box
  • 47095 - HMG-box
  • 0.0004237Direct
    51735,56327
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 56327 - LDH C-terminal domain-like
  • 0.0004237Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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