SUPERFAMILY 1.75 HMM library and genome assignments server

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Xenopus ANatomical entity (XAN): intersomitic neuron

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   anatomical group [XAO:0003001] <2>(418|530) (420|307|132)
+ + + 3:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   anatomical system [XAO:0003002] <19>(285|379) (290|203|91)
+ + + 3:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + + 3:   whole organism [XAO:0003004] <12>(463|595) (466|331|144)
+ + 2:   nervous system [XAO:0000177] <11>(134|200) (140|112|51)
+ + 2:   anatomical region [XAO:0003186] <51>(373|484) (374|284|122)
+ + 2:   cell [XAO:0003012] <71>(92|101) (93|35|16)
+ 1:   neuron [XAO:0003023] <19>(10|12) (11|3|1)
+ 1:   intersomitic region [XAO:0004074] <4>(6|9) (7|4|1)
0:   intersomitic neuron [XAO:0004078](2|2) (2|1|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Tubulin C-terminal domain-like0.00007571Direct
Tubulin nucleotide-binding domain-like0.00007571Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Tubulin, C-terminal domain0.00008096Direct
Tubulin, GTPase domain0.00008096Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Tubulin C-terminal domain-like0.00005583Direct
Tubulin nucleotide-binding domain-like0.00005583Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.00005583Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)