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Xenopus ANatomical entity (XAN): preplacodal ectoderm

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   embryo [XAO:0000113] <8>(133|185) (135|87|37)
+ + + + 4:   primary germ layer [XAO:0003011] <4>(107|153) (108|71|29)
+ + + + 4:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   ectoderm [XAO:0000001] <15>(61|84) (61|42|11)
+ + + 3:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + + 3:   whole organism [XAO:0003004] <12>(463|595) (466|331|144)
+ + 2:   multicellular anatomical structure [XAO:0005002] <4>(437|563) (439|321|141)
+ + 2:   neuroectoderm [XAO:0000042] <9>(25|29) (26|14|5)
+ 1:   tissue [XAO:0003040] <186>(180|249) (187|128|57)
+ 1:   sensorial layer of neurectoderm [XAO:0000270] <1>(6|4) (7|1|1)
0:   preplacodal ectoderm [XAO:0004092] <3>(6|4) (7|1|1)
- 1:   anterior placodal area [XAO:0004206] <1>(6|4) (6|1|1)
- 1:   lateral preplacodal ectoderm [XAO:0005197](0|0) (0|0|0)
- 1:   posterior placodal area [XAO:0004207](1|2) (2|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
PriA/YqbF domain0Direct
Homeodomain-like0.00000000000172Direct
HLH, helix-loop-helix DNA-binding domain0.0000001559Direct
Glucocorticoid receptor-like (DNA-binding domain)0.00001529Direct
GINS helical bundle-like0.00003658Direct
"Winged helix" DNA-binding domain0.00007652Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain0.000000000009864Direct
Forkhead DNA-binding domain0.0000000488Direct
HLH, helix-loop-helix DNA-binding domain0.0000002495Direct
Paired domain0.00008324Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
PriA/YqbF domain0Direct
Homeodomain-like0.000000000001199Direct
HLH, helix-loop-helix DNA-binding domain0.0000001103Direct
Glucocorticoid receptor-like (DNA-binding domain)0.0000111Direct
GINS helical bundle-like0.00002678Direct
"Winged helix" DNA-binding domain0.00005644Direct
HMG-box0.02531Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.000008867Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57196,57196,57184
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.001448Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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