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Xenopus ANatomical entity (XAN): pronephric tubule

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + 7:   anatomical group [XAO:0003001] <2>(418|530) (420|307|132)
+ + + + + + 6:   compound organ [XAO:0003041] <8>(335|444) (336|275|123)
+ + + + + + 6:   anatomical system [XAO:0003002] <19>(285|379) (290|203|91)
+ + + + + + 6:   urogenital system [XAO:0000140] <7>(182|243) (182|122|58)
+ + + + + + 6:   anatomical region [XAO:0003186] <51>(373|484) (374|284|122)
+ + + + + 5:   cavitated compound organ [XAO:0003165] <21>(287|393) (290|247|112)
+ + + + + 5:   urinary system [XAO:0000143] <5>(17|22) (17|7|5)
+ + + + + 5:   trunk region [XAO:0000054] <1>(216|301) (216|157|82)
+ + + + + 5:   organism subdivision [XAO:0003013] <11>(378|498) (381|291|125)
+ + + + 4:   anatomical space [XAO:0003190] <22>(18|22) (18|9|5)
+ + + + 4:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + + 4:   trunk [XAO:0003025] <10>(215|300) (215|157|82)
+ + + + 4:   embryo [XAO:0000113] <8>(133|185) (135|87|37)
+ + + + 4:   kidney [XAO:0003267] <2>(14|20) (14|6|5)
+ + + 3:   coelom [XAO:0004521] <1>(12|16) (12|5|4)
+ + + 3:   whole organism [XAO:0003004] <12>(463|595) (466|331|144)
+ + + 3:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + + 3:   embryonic kidney [XAO:0005243] <1>(11|14) (11|5|4)
+ + 2:   multicellular anatomical structure [XAO:0005002] <4>(437|563) (439|321|141)
+ + 2:   multi-tissue structure [XAO:0003037] <131>(48|62) (51|30|14)
+ + 2:   pronephric kidney [XAO:0002000] <5>(8|11) (8|4|2)
+ 1:   pronephric nephron [XAO:0000285] <1>(6|6) (6|2|0)
+ 1:   tissue [XAO:0003040] <186>(180|249) (187|128|57)
0:   pronephric tubule [XAO:0004105] <2>(6|6) (6|2|0)
- 1:   proximal tubule [XAO:0004518] <3>(5|3) (5|0|0)
- 1:   distal tubule [XAO:0004519] <2>(3|4) (3|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain-like0.00000000003711Direct
lambda repressor-like DNA-binding domains0.0001941Direct
ARID-like0.0007247Direct
Thioredoxin-like0.01951Inherited
Clavaminate synthase-like0.03677Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.06248Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain0.00000000001411Direct
Glutathione peroxidase-like0.000001205Direct
POU-specific domain0.00003856Direct
Hypoxia-inducible factor Hif2a, C-terminal domain0.0003564Direct
ARID domain0.0005679Direct
Transforming growth factor (TGF)-beta0.02163Inherited


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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Homeodomain-like0.00000000002595Direct
lambda repressor-like DNA-binding domains0.0001448Direct
ARID-like0.0005486Direct
Thioredoxin-like0.0155Inherited
Clavaminate synthase-like0.02984Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.05161Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
50044,50156
  • 50044 - SH3-domain
  • 50156 - PDZ domain-like
  • 0Direct
    47413,46689
  • 47413 - lambda repressor-like DNA-binding domains
  • 46689 - Homeodomain-like
  • 0.0008307Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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