SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Xenopus ANatomical entity (XAN): pallium

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + 7:   anatomical group [XAO:0003001] <2>(419|531) (421|308|133)
+ + + + + + 6:   anatomical region [XAO:0003186] <51>(374|484) (375|284|123)
+ + + + + + 6:   anatomical system [XAO:0003002] <19>(286|380) (291|204|92)
+ + + + + 5:   head region [XAO:0000040] <4>(180|246) (183|139|58)
+ + + + + 5:   nervous system [XAO:0000177] <11>(135|201) (141|113|52)
+ + + + + 5:   compound organ [XAO:0003041] <8>(336|444) (337|275|124)
+ + + + + 5:   organism subdivision [XAO:0003013] <11>(379|498) (382|291|126)
+ + + + 4:   cavitated compound organ [XAO:0003165] <21>(288|393) (291|247|113)
+ + + + 4:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + + 4:   head [XAO:0003024] <22>(180|245) (183|139|58)
+ + + + 4:   central nervous system [XAO:0000215] <7>(130|191) (133|108|48)
+ + + 3:   whole organism [XAO:0003004] <12>(464|596) (467|333|144)
+ + + 3:   brain [XAO:0000010] <14>(79|120) (79|65|29)
+ + + 3:   anatomical structure [XAO:0003000] <11>(576|729) (576|397|162)
+ + 2:   forebrain [XAO:0000011] <5>(13|12) (13|3|4)
+ + 2:   multicellular anatomical structure [XAO:0005002] <4>(438|563) (440|323|141)
+ 1:   multi-tissue structure [XAO:0003037] <131>(48|62) (51|30|14)
+ 1:   telencephalon [XAO:0000012] <9>(3|3) (3|1|0)
0:   pallium [XAO:0004302] <4>(2|2) (3|1|0)
- 1:   dorsal pallium [XAO:0004548](0|0) (0|0|0)
- 1:   lateral pallium [XAO:0004563](1|1) (1|1|0)
- 1:   medial pallium [XAO:0004570](1|1) (1|0|0)
- 1:   ventral pallium [XAO:0004594](1|1) (2|1|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Family A G protein-coupled receptor-like0.00004164Direct
Homeodomain-like0.0006517Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Rhodopsin-like0.00002849Direct
Homeodomain0.0003965Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Family A G protein-coupled receptor-like0.0000305Direct
Homeodomain-like0.0004927Direct
Glucocorticoid receptor-like (DNA-binding domain)0.001759Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.0011Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)