SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Xenopus ANatomical entity (XAN): pharyngeal mesenchyme

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + + 3:   whole organism [XAO:0003004] <12>(463|595) (466|331|144)
+ + + 3:   multicellular anatomical structure [XAO:0005002] <4>(437|563) (439|321|141)
+ + + 3:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   organism subdivision [XAO:0003013] <11>(378|498) (381|291|125)
+ + + 3:   head region [XAO:0000040] <4>(179|247) (182|139|57)
+ + 2:   anatomical region [XAO:0003186] <51>(373|484) (374|284|122)
+ + 2:   tissue [XAO:0003040] <186>(180|249) (187|128|57)
+ + 2:   head [XAO:0003024] <22>(179|246) (182|139|57)
+ 1:   mesenchyme [XAO:0003046] <11>(13|19) (13|6|2)
+ 1:   pharyngeal region [XAO:0004261] <7>(21|25) (23|9|6)
0:   pharyngeal mesenchyme [XAO:0004524](0|1) (0|0|1)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
I set domains0.0005081Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.0003455Direct