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Xenopus ANatomical entity (XAN): ectoderm

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + + + 4:   whole organism [XAO:0003004] <12>(450|576) (454|327|143)
+ + + 3:   multicellular anatomical structure [XAO:0005002] <4>(437|563) (439|323|141)
+ + + 3:   Xenopus anatomical entity [XAO:0000000] <9>
+ + 2:   embryo [XAO:0000113] <8>(133|186) (135|86|36)
+ + 2:   tissue [XAO:0003040] <184>(180|249) (186|128|57)
+ 1:   primary germ layer [XAO:0003011] <4>(107|154) (108|70|28)
0:   ectoderm [XAO:0000001] <15>(61|84) (61|41|10)
- 1:   epidermis [XAO:0000028] <10>(3|6) (3|2|0)
- 1:   fin [XAO:0000002] <9>(7|8) (8|1|2)
- 1:   neuroectoderm [XAO:0000042] <9>(25|29) (26|13|4)
- 1:   animal cap [XAO:0000036] <2>(1|1) (1|1|0)
- 1:   neural plate border [XAO:0004104] <2>(5|6) (6|2|0)
- 1:   non-neural ectoderm [XAO:0004091] <2>(3|3) (3|1|0)
- 1:   cranial placode [XAO:0000305] <1>(15|15) (15|5|1)
- 1:   hatching gland [XAO:0000034] <1>(0|0) (0|0|0)
- 1:   mouth primordium [XAO:0000269] <1>(3|3) (3|0|0)
- 1:   ectodermal cell [XAO:0003245](0|0) (0|0|0)
- 1:   hypophyseal primordium [XAO:0000267](0|1) (0|0|0)
- 1:   non-involuting marginal zone [XAO:0000253](1|1) (1|2|1)
- 1:   sensorial layer [XAO:0000320](2|2) (2|0|0)
- 1:   stomodeal-hypophyseal primordium [XAO:0000032](3|2) (3|1|0)
- 1:   trunk placode [XAO:0000461](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
Ribosomal protein L10-like0Direct
Subdomain of clathrin and coatomer appendage domain0Direct
Notch domain0Direct
DLC0Direct
SMAD MH1 domain0Direct
Uracil-DNA glycosylase-like0Direct
14-3-3 protein0Direct
Ribosomal L27 protein-like0Direct
Subunits of heterodimeric actin filament capping protein Capz0Direct
Moesin tail domain0Direct
Zn-binding ribosomal proteins0Direct
SPOC domain-like0Direct
Alanine racemase C-terminal domain-like0Direct
Surp module (SWAP domain)0Direct
Hedgehog/DD-peptidase0Direct
TK C-terminal domain-like0Direct
PAH2 domain0Direct
Nop domain0Direct
LuxS/MPP-like metallohydrolase0Direct
Synuclein0Direct
RBP11-like subunits of RNA polymerase0Direct
Nucleoplasmin-like core domain0Direct
Ribosomal proteins L15p and L18e0Direct
F1F0 ATP synthase subunit C0Direct
C-terminal domain of adenylylcyclase associated protein0Direct
Delta-sleep-inducing peptide immunoreactive peptide0Direct
PLP-binding barrel0Direct
GINS helical bundle-like0Direct
PriA/YqbF domain0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
E2F-DP heterodimerization region0Direct
Tim10-like0Direct
Ribulose-phoshate binding barrel0Direct
Zn-finger domain of Sec23/240Direct
alpha-catenin/vinculin-like0Direct
RNA-binding domain, RBD0.00000221Direct
Tubulin C-terminal domain-like0.001233Inherited
Frizzled cysteine-rich domain0.002308Inherited
"Winged helix" DNA-binding domain0.003528Inherited
Homeodomain-like0.003833Inherited
Tubulin nucleotide-binding domain-like0.004079Inherited
HLH, helix-loop-helix DNA-binding domain0.008498Inherited
Orange domain-like0.04318Inherited
Sema domain0.05012Inherited
Snake toxin-like0.05427Inherited
Cytokine0.1306Inherited
Plexin repeat0.1799Inherited
Intermediate filament protein, coiled coil region0.1942Inherited
beta-beta-alpha zinc fingers0.222Inherited
HMG-box0.2361Inherited
Cyclin-like0.3682Inherited
Kazal-type serine protease inhibitors0.4141Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.5792Inherited
TIMP-like0.6537Inherited
lambda repressor-like DNA-binding domains0.7367Inherited
Growth factor receptor domain0.7391Inherited
p53-like transcription factors0.7611Inherited
Kringle-like0.9239Inherited
Cystine-knot cytokines0.9367Inherited
EGF/Laminin1Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Cell cycle transcription factor e2f-dp0Direct
Pseudouridine synthase I TruA0Direct
MPP-like0Direct
Eukaryotic ODC-like0Direct
Tim10/DDP0Direct
C-terminal domain of adenylylcyclase associated protein0Direct
TRASH domain0Direct
Synuclein0Direct
Nucleoplasmin-like core domain0Direct
RUNT domain0Direct
Delta-sleep-inducing peptide immunoreactive peptide0Direct
Notch domain0Direct
P4 origin-binding domain-like0Direct
Branched-chain alpha-keto acid dehydrogenase Pyr module0Direct
Extracellular domain of cell surface receptors0Direct
Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain0Direct
Nop domain0Direct
Ribosomal proteins L15p and L18e0Direct
Prefoldin0Direct
SIAH, seven in absentia homolog0Direct
E2F dimerization segment0Direct
Moesin tail domain0Direct
CAT-like0Direct
Alanine racemase-like, N-terminal domain0Direct
NLI interacting factor-like phosphatase0Direct
F1F0 ATP synthase subunit C0Direct
14-3-3 protein0Direct
Polo-box duplicated region0Direct
DLC0Direct
Ran-binding domain0Direct
Ferritin0Direct
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain0Direct
ECR1 N-terminal domain-like0Direct
Branched-chain alpha-keto acid dehydrogenase PP module0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
PAH2 domain0Direct
Ubiquitin carboxyl-terminal hydrolase UCH-L0Direct
SMAD domain0Direct
Noggin0Direct
S-adenosylhomocystein hydrolase0Direct
Surp module (SWAP domain)0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
SMAD MH1 domain0Direct
NTF2-like0Direct
SH3BGR (SH3-binding, glutamic acid-rich protein-like)0Direct
GDI-like N domain0Direct
Helical domain of Sec23/240Direct
HAT/Suf repeat0Direct
Zn-finger domain of Sec23/240Direct
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain0Direct
Alpha-adaptin ear subdomain-like0Direct
Hedgehog (development protein), N-terminal signaling domain0Direct
Clathrin adaptor appendage, alpha and beta chain-specific domain0Direct
alpha-catenin/vinculin0Direct
Canonical RBD0.00001166Direct
Tubulin, C-terminal domain0.001199Inherited
Tubulin, GTPase domain0.001199Inherited
Frizzled cysteine-rich domain0.002271Inherited
Sema domain0.006175Inherited
HLH, helix-loop-helix DNA-binding domain0.006552Inherited
Homeodomain0.007009Inherited
Forkhead DNA-binding domain0.02545Inherited
Cell cycle control phosphatase, catalytic domain0.0346Inherited
Hairy Orange domain0.03942Inherited
Fibroblast growth factors (FGF)0.1337Inherited
LIM domain0.1499Inherited
Classic zinc finger, C2H20.1532Inherited
Plexin repeat0.1826Inherited
Arginine methyltransferase0.1886Inherited
Intermediate filament protein, coiled coil region0.1995Inherited
HMG-box0.2109Inherited
POU-specific domain0.2197Inherited
Ephrin receptor ligand binding domain0.2312Inherited
Glutathione peroxidase-like0.2554Inherited
Cyclin0.2577Inherited
Ovomucoid domain III-like0.4059Inherited
Growth factor receptor domain0.472Inherited
ets domain0.5534Inherited
Multidrug efflux transporter AcrB transmembrane domain0.6361Inherited
Transforming growth factor (TGF)-beta0.7252Inherited
Paired domain0.7403Inherited
T-box0.9823Inherited
Kringle modules1Inherited
Calmodulin-like1Inherited


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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Nucleoplasmin-like core domain0Direct
Delta-sleep-inducing peptide immunoreactive peptide0Direct
alpha-catenin/vinculin-like0Direct
C-terminal domain of adenylylcyclase associated protein0Direct
Notch domain0Direct
Subdomain of clathrin and coatomer appendage domain0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
SPOC domain-like0Direct
Uracil-DNA glycosylase-like0Direct
Subunits of heterodimeric actin filament capping protein Capz0Direct
Ribulose-phoshate binding barrel0Direct
GINS helical bundle-like0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
F1F0 ATP synthase subunit C0Direct
Synuclein0Direct
Hedgehog/DD-peptidase0Direct
Ribosomal L27 protein-like0Direct
14-3-3 protein0Direct
TK C-terminal domain-like0Direct
Surp module (SWAP domain)0Direct
Ribosomal proteins L15p and L18e0Direct
Tim10-like0Direct
DLC0Direct
Zn-finger domain of Sec23/240Direct
Alanine racemase C-terminal domain-like0Direct
RBP11-like subunits of RNA polymerase0Direct
PLP-binding barrel0Direct
SMAD MH1 domain0Direct
E2F-DP heterodimerization region0Direct
Moesin tail domain0Direct
PAH2 domain0Direct
Ribosomal protein L10-like0Direct
Nop domain0Direct
LuxS/MPP-like metallohydrolase0Direct
PriA/YqbF domain0Direct
Zn-binding ribosomal proteins0Direct
RNA-binding domain, RBD0.000001567Direct
Tubulin C-terminal domain-like0.0009346Direct
Frizzled cysteine-rich domain0.001764Inherited
"Winged helix" DNA-binding domain0.002705Inherited
Homeodomain-like0.002944Inherited
Tubulin nucleotide-binding domain-like0.003137Inherited
HLH, helix-loop-helix DNA-binding domain0.006619Inherited
Orange domain-like0.03522Inherited
Sema domain0.04108Inherited
Snake toxin-like0.04453Inherited
Cytokine0.1128Inherited
Plexin repeat0.1579Inherited
Intermediate filament protein, coiled coil region0.1712Inherited
beta-beta-alpha zinc fingers0.1974Inherited
HMG-box0.2107Inherited
Cyclin-like0.3371Inherited
Kazal-type serine protease inhibitors0.3815Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.5421Inherited
TIMP-like0.6171Inherited
lambda repressor-like DNA-binding domains0.701Inherited
Growth factor receptor domain0.7035Inherited
p53-like transcription factors0.7256Inherited
Kringle-like0.8953Inherited
Cystine-knot cytokines0.9083Inherited
EGF/Laminin1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
63411,63411
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
  • 0Direct
    57184,100895
  • 57184 - Growth factor receptor domain
  • 100895 - Kazal-type serine protease inhibitors
  • 0Direct
    82615,82615
  • 82615 - Polo-box domain
  • 82615 - Polo-box domain
  • 0Direct
    48371,46785
  • 48371 - ARM repeat
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    46785,144074
  • 46785 - "Winged helix" DNA-binding domain
  • 144074 - E2F-DP heterodimerization region
  • 0Direct
    53223,51735
  • 53223 - Aminoacid dehydrogenase-like, N-terminal domain
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 0Direct
    47095,47095
  • 47095 - HMG-box
  • 47095 - HMG-box
  • 0Direct
    110324,50249
  • 110324 - Ribosomal L27 protein-like
  • 50249 - Nucleic acid-binding proteins
  • 0Direct
    51230,47005
  • 51230 - Single hybrid motif
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 0Direct
    57756,57756
  • 57756 - Retrovirus zinc finger-like domains
  • 57756 - Retrovirus zinc finger-like domains
  • 0Direct
    47220,47220
  • 47220 - alpha-catenin/vinculin-like
  • 47220 - alpha-catenin/vinculin-like
  • 0Direct
    51419,50621
  • 51419 - PLP-binding barrel
  • 50621 - Alanine racemase C-terminal domain-like
  • 0Direct
    52518,52922
  • 52518 - Thiamin diphosphate-binding fold (THDP-binding)
  • 52922 - TK C-terminal domain-like
  • 0Direct
    82919,53300
  • 82919 - Zn-finger domain of Sec23/24
  • 53300 - vWA-like
  • 0Direct
    49348,55711
  • 49348 - Clathrin adaptor appendage domain
  • 55711 - Subdomain of clathrin and coatomer appendage domain
  • 0Direct
    52540,47917
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct
    52540,46785
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    52540,53254
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 53254 - Phosphoglycerate mutase-like
  • 0Direct
    54534,54534
  • 54534 - FKBP-like
  • 54534 - FKBP-like
  • 0Direct
    57184,49265
  • 57184 - Growth factor receptor domain
  • 49265 - Fibronectin type III
  • 0Direct
    57196,90193
  • 57196 - EGF/Laminin
  • 90193 - Notch domain
  • 0Direct
    52518,52518
  • 52518 - Thiamin diphosphate-binding fold (THDP-binding)
  • 52518 - Thiamin diphosphate-binding fold (THDP-binding)
  • 0Direct
    47005,52777
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 52777 - CoA-dependent acyltransferases
  • 0Direct
    54928,54928
  • 54928 - RNA-binding domain, RBD
  • 54928 - RNA-binding domain, RBD
  • 0.000889Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.0009346Direct
    103575,48726
  • 103575 - Plexin repeat
  • 48726 - Immunoglobulin
  • 0.01584Inherited
    57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.02552Inherited
    47459,158457
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 158457 - Orange domain-like
  • 0.03522Inherited
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.03993Inherited
    101912,103575
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 0.04108Inherited
    63501,50242
  • 63501 - Frizzled cysteine-rich domain
  • 50242 - TIMP-like
  • 0.06083Inherited
    50729,56112
  • 50729 - PH domain-like
  • 56112 - Protein kinase-like (PK-like)
  • 0.06083Inherited
    57603,57603
  • 57603 - FnI-like domain
  • 57603 - FnI-like domain
  • 0.06193Inherited
    64593,64593
  • 64593 - Intermediate filament protein, coiled coil region
  • 64593 - Intermediate filament protein, coiled coil region
  • 0.1149Inherited
    57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.1839Inherited
    55550,56112
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.2188Inherited
    56112,47769
  • 56112 - Protein kinase-like (PK-like)
  • 47769 - SAM/Pointed domain
  • 0.32Inherited
    47413,46689
  • 47413 - lambda repressor-like DNA-binding domains
  • 46689 - Homeodomain-like
  • 0.5587Inherited
    50044,55550
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 0.657Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.8389Inherited
    81383,52047
  • 81383 - F-box domain
  • 52047 - RNI-like
  • 0.849Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57184,52058,57184
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0Direct
    51230,47005,52777
  • 51230 - Single hybrid motif
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 52777 - CoA-dependent acyltransferases
  • 0Direct
    54791,54791,54791
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 0Direct
    50249,50249,50249
  • 50249 - Nucleic acid-binding proteins
  • 50249 - Nucleic acid-binding proteins
  • 50249 - Nucleic acid-binding proteins
  • 0Direct
    47220,47220,47220
  • 47220 - alpha-catenin/vinculin-like
  • 47220 - alpha-catenin/vinculin-like
  • 47220 - alpha-catenin/vinculin-like
  • 0Direct
    101912,103575,48726
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 48726 - Immunoglobulin
  • 0.01584Inherited
    57196,57196,57184
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.01939Inherited
    50044,55550,56112
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.08838Inherited
    48371,48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.473Inherited
    49313,49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.9278Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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