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Xenopus ANatomical entity (XAN): midbrain-hindbrain boundary

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   embryo [XAO:0000113] <8>(133|186) (135|86|36)
+ + + + + 5:   anatomical group [XAO:0003001] <2>(374|481) (379|294|130)
+ + + + 4:   anatomical system [XAO:0003002] <19>(239|330) (246|188|86)
+ + + + 4:   primary germ layer [XAO:0003011] <4>(107|153) (108|70|28)
+ + + + 4:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + + + 4:   whole organism [XAO:0003004] <12>(450|576) (454|327|143)
+ + + + 4:   anatomical region [XAO:0003186] <43>(373|484) (375|285|122)
+ + + 3:   ectoderm [XAO:0000001] <15>(61|84) (61|42|10)
+ + + 3:   compound organ [XAO:0003041] <8>(334|444) (337|276|123)
+ + + 3:   multicellular anatomical structure [XAO:0005002] <4>(437|563) (439|323|141)
+ + + 3:   nervous system [XAO:0000177] <11>(134|200) (140|113|51)
+ + + 3:   head region [XAO:0000040] <4>(178|247) (182|140|57)
+ + + 3:   organism subdivision [XAO:0003013] <11>(378|498) (383|292|125)
+ + 2:   neuroectoderm [XAO:0000042] <9>(25|29) (26|14|4)
+ + 2:   tissue [XAO:0003040] <184>(180|248) (186|128|57)
+ + 2:   cavitated compound organ [XAO:0003165] <23>(287|393) (291|248|112)
+ + 2:   central nervous system [XAO:0000215] <7>(129|190) (132|108|47)
+ + 2:   Xenopus anatomical entity [XAO:0000000] <9>
+ + 2:   head [XAO:0003024] <22>(178|246) (182|140|57)
+ 1:   brain [XAO:0000010] <15>(78|119) (80|65|28)
+ 1:   anatomical line [XAO:0004003] <4>(6|6) (6|2|1)
+ 1:   neural plate [XAO:0000249] <10>(18|18) (18|7|2)
0:   midbrain-hindbrain boundary [XAO:0000016] <1>(4|5) (4|1|1)
- 1:   isthmic nucleus [XAO:0004557](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain-like0.00000008903Direct
GINS helical bundle-like0.00004339Direct
HMG-box0.00007505Direct
Frizzled cysteine-rich domain0.0001636Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain0.000001037Direct
Paired domain0.00001271Direct
HMG-box0.00009015Direct
Frizzled cysteine-rich domain0.0001745Direct
Sema domain0.0008033Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Homeodomain-like0.00000006227Direct
GINS helical bundle-like0.00003157Direct
HMG-box0.00005488Direct
Frizzled cysteine-rich domain0.0001208Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
103575,48726
  • 103575 - Plexin repeat
  • 48726 - Immunoglobulin
  • 0.0001593Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    101912,103575,48726
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 48726 - Immunoglobulin
  • 0.0001593Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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