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Xenopus ANatomical entity (XAN): skin

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + + 4:   whole organism [XAO:0003004] <12>(461|598) (465|335|145)
+ + + + 4:   anatomical structure [XAO:0003000] <11>(577|733) (577|400|163)
+ + + 3:   anatomical group [XAO:0003001] <2>(414|530) (418|309|134)
+ + + 3:   multicellular anatomical structure [XAO:0005002] <4>(436|565) (440|325|142)
+ + 2:   organism subdivision [XAO:0003013] <11>(375|498) (381|292|126)
+ + 2:   anatomical system [XAO:0003002] <19>(283|382) (289|204|93)
+ 1:   dermal system [XAO:0000176] <1>(13|15) (14|7|3)
+ 1:   surface structure [XAO:0003028] <14>(22|28) (25|11|5)
0:   skin [XAO:0000023] <7>(11|14) (12|7|3)
- 1:   epidermis [XAO:0000028] <10>(3|6) (3|2|0)
- 1:   dermis [XAO:0000217] <3>(0|0) (0|0|0)
- 1:   pigment cell [XAO:0003014] <3>(2|2) (2|0|0)
- 1:   skin gland [XAO:0005071] <3>(0|0) (0|0|0)
- 1:   goblet cell [XAO:0004392](0|0) (0|0|0)
- 1:   neuromast mantle cell [XAO:0003258](0|0) (0|0|0)
- 1:   neuromast support cell [XAO:0003259](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
14-3-3 protein0Direct
GroEL-intermediate domain like0.0002159Direct
GroEL equatorial domain-like0.0002159Direct
Plakin repeat0.0003285Direct
GroEL apical domain-like0.0006046Direct
Intermediate filament protein, coiled coil region0.002639Inherited
Tubulin C-terminal domain-like0.0461Inherited
Tubulin nucleotide-binding domain-like0.0461Inherited
Family A G protein-coupled receptor-like1Inherited
HLH, helix-loop-helix DNA-binding domain1Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Ferritin0Direct
14-3-3 protein0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Glutathione S-transferase (GST), N-terminal domain0.00001461Direct
Proteasome subunits0.00008452Direct
Plakin repeat0.0002996Direct
Intermediate filament protein, coiled coil region0.001861Inherited
Multidrug efflux transporter AcrB transmembrane domain0.01967Inherited
Tubulin, GTPase domain0.0361Inherited
Tubulin, C-terminal domain0.0361Inherited
Calmodulin-like0.1352Inherited
HLH, helix-loop-helix DNA-binding domain1Inherited
Forkhead DNA-binding domain1Inherited
Rhodopsin-like1Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
14-3-3 protein0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
GroEL-intermediate domain like0.0001607Direct
GroEL equatorial domain-like0.0001607Direct
Plakin repeat0.0002457Direct
GroEL apical domain-like0.000456Direct
BPTI-like0.000829Direct
Intermediate filament protein, coiled coil region0.002028Inherited
Tubulin C-terminal domain-like0.03778Inherited
Tubulin nucleotide-binding domain-like0.03778Inherited
HLH, helix-loop-helix DNA-binding domain1Inherited
Family A G protein-coupled receptor-like1Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
52540,47917
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct
    64593,64593
  • 64593 - Intermediate filament protein, coiled coil region
  • 64593 - Intermediate filament protein, coiled coil region
  • 0Direct
    52833,47616
  • 52833 - Thioredoxin-like
  • 47616 - GST C-terminal domain-like
  • 0.00006218Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.0002457Direct
    46966,47473
  • 46966 - Spectrin repeat
  • 47473 - EF-hand
  • 0.0002763Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.000829Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.03778Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0002457Direct
    46966,46966,47473
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 47473 - EF-hand
  • 0.0002763Direct
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.0005319Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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