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Xenopus ANatomical entity (XAN): neuroectoderm

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   anatomical structure [XAO:0003000] <11>(577|733) (577|400|163)
+ + + 3:   embryo [XAO:0000113] <8>(134|185) (134|89|38)
+ + + 3:   whole organism [XAO:0003004] <12>(461|598) (465|335|145)
+ + 2:   multicellular anatomical structure [XAO:0005002] <4>(436|565) (440|325|142)
+ + 2:   primary germ layer [XAO:0003011] <4>(109|155) (109|73|30)
+ 1:   tissue [XAO:0003040] <186>(182|250) (189|130|58)
+ 1:   ectoderm [XAO:0000001] <15>(62|85) (62|43|11)
0:   neuroectoderm [XAO:0000042] <9>(27|31) (27|15|5)
- 1:   neural plate [XAO:0000249] <10>(19|17) (19|7|3)
- 1:   neural crest [XAO:0000048] <8>(12|15) (12|6|2)
- 1:   cranial placode [XAO:0000305] <2>(12|14) (12|6|2)
- 1:   sensorial layer of neurectoderm [XAO:0000270] <1>(6|5) (7|1|1)
- 1:   anterior neuroectoderm [XAO:0005263](0|0) (0|0|0)
- 1:   neurocoel [XAO:0000252](0|0) (0|0|0)
- 1:   neuroectoderm inner layer [XAO:0000044](0|0) (0|0|0)
- 1:   neuroectoderm outer layer [XAO:0000043](2|2) (2|0|0)
- 1:   superficial layer of neurectoderm [XAO:0005241](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain-like0Direct
Synuclein0Direct
GINS helical bundle-like0Direct
PriA/YqbF domain0Direct
HLH, helix-loop-helix DNA-binding domain0Direct
Hedgehog/DD-peptidase0Direct
"Winged helix" DNA-binding domain0.0000000006037Direct
Cytokine0.000000001978Direct
Frizzled cysteine-rich domain0.00000000398Direct
Sema domain0.00002139Direct
Glucocorticoid receptor-like (DNA-binding domain)0.00002961Direct
Plexin repeat0.00003691Direct
p53-like transcription factors0.00009822Direct
HMG-box0.0001603Direct
lambda repressor-like DNA-binding domains0.0002557Direct
Orange domain-like0.0003415Direct
Snake toxin-like0.0004147Direct
Cystine-knot cytokines0.0009866Direct
Cadherin-like0.001313Inherited
Kazal-type serine protease inhibitors0.007343Inherited
TIMP-like0.008617Inherited
EGF/Laminin0.02352Inherited
beta-beta-alpha zinc fingers0.02661Inherited
RNA-binding domain, RBD0.02998Inherited
Growth factor receptor domain0.07081Inherited
Cyclin-like0.1381Inherited
Kringle-like0.1612Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Hedgehog (development protein), N-terminal signaling domain0Direct
Homeodomain0Direct
RUNT domain0Direct
Extracellular domain of cell surface receptors0Direct
Noggin0Direct
Synuclein0Direct
HLH, helix-loop-helix DNA-binding domain0.000000000000004453Direct
Forkhead DNA-binding domain0.0000000000002016Direct
Frizzled cysteine-rich domain0.000000009083Direct
Fibroblast growth factors (FGF)0.0000000139Direct
Sema domain0.000004046Direct
POU-specific domain0.0000308Direct
Plexin repeat0.00007244Direct
Cell cycle control phosphatase, catalytic domain0.0001286Direct
HMG-box0.0002875Direct
Hairy Orange domain0.0003988Direct
P4 origin-binding domain-like0.0009167Direct
Classic zinc finger, C2H20.001045Inherited
LIM domain0.001287Inherited
Paired domain0.001385Inherited
ets domain0.002125Inherited
Ovomucoid domain III-like0.004558Inherited
Transforming growth factor (TGF)-beta0.007455Inherited
T-box0.01701Inherited
Glutathione peroxidase-like0.02241Inherited
Ephrin ectodomain0.03294Inherited
Arginine methyltransferase0.03294Inherited
Cyclin0.04042Inherited
Canonical RBD0.04522Inherited
Ephrin receptor ligand binding domain0.09528Inherited
Kringle modules0.1469Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
HLH, helix-loop-helix DNA-binding domain0Direct
Hedgehog/DD-peptidase0Direct
Synuclein0Direct
GINS helical bundle-like0Direct
Homeodomain-like0Direct
PriA/YqbF domain0Direct
"Winged helix" DNA-binding domain0.0000000004212Direct
Cytokine0.000000001381Direct
Frizzled cysteine-rich domain0.000000002785Direct
Sema domain0.00001551Direct
Glucocorticoid receptor-like (DNA-binding domain)0.00002156Direct
Plexin repeat0.00002693Direct
p53-like transcription factors0.00007248Direct
HMG-box0.0001188Direct
lambda repressor-like DNA-binding domains0.0001907Direct
Orange domain-like0.0002556Direct
Snake toxin-like0.0003113Direct
Cystine-knot cytokines0.0007481Direct
Cadherin-like0.0009996Direct
Kazal-type serine protease inhibitors0.005733Inherited
TIMP-like0.006732Inherited
EGF/Laminin0.01874Inherited
beta-beta-alpha zinc fingers0.02129Inherited
RNA-binding domain, RBD0.0241Inherited
Growth factor receptor domain0.05885Inherited
Cyclin-like0.1196Inherited
Kringle-like0.1405Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.0000002697Direct
    101912,103575
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 0.00001551Direct
    47459,158457
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 158457 - Orange domain-like
  • 0.0002556Direct
    81383,52047
  • 81383 - F-box domain
  • 52047 - RNI-like
  • 0.0003113Direct
    63501,50242
  • 63501 - Frizzled cysteine-rich domain
  • 50242 - TIMP-like
  • 0.0004846Direct
    50729,56112
  • 50729 - PH domain-like
  • 56112 - Protein kinase-like (PK-like)
  • 0.0004846Direct
    103575,48726
  • 103575 - Plexin repeat
  • 48726 - Immunoglobulin
  • 0.0006504Direct
    47413,46689
  • 47413 - lambda repressor-like DNA-binding domains
  • 46689 - Homeodomain-like
  • 0.0006506Direct
    57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.0007224Direct
    49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.001729Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.003593Inherited
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.01193Inherited
    57603,57603
  • 57603 - FnI-like domain
  • 57603 - FnI-like domain
  • 0.01424Inherited
    56112,47769
  • 56112 - Protein kinase-like (PK-like)
  • 47769 - SAM/Pointed domain
  • 0.04773Inherited
    57440,57440
  • 57440 - Kringle-like
  • 57440 - Kringle-like
  • 0.07788Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    101912,103575,48726
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 48726 - Immunoglobulin
  • 0.0006504Direct
    49313,49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.0007135Direct
    50044,55550,56112
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.0009472Direct
    57196,57196,57184
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.009928Inherited
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.01193Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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