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Xenopus ANatomical entity (XAN): circumblastoporal collar

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Xenopus anatomical entity [XAO:0000000] <9>
+ + 2:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + 2:   whole organism [XAO:0003004] <12>(450|576) (454|327|143)
+ + 2:   embryo [XAO:0000113] <8>(133|186) (135|86|36)
+ 1:   embryonic structure [XAO:0003042] <57>(42|55) (44|26|12)
0:   circumblastoporal collar [XAO:0000082] <2>(8|7) (8|2|1)
- 1:   involuted dorsal mesoderm [XAO:0000083](7|7) (7|1|0)
- 1:   involuted ventral mesoderm [XAO:0000084](3|4) (3|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain-like0.0000005002Direct
Cystine-knot cytokines0.0002633Direct
HLH, helix-loop-helix DNA-binding domain0.0004986Direct
p53-like transcription factors0.004103Inherited
Frizzled cysteine-rich domain0.006712Inherited
Snake toxin-like0.02312Inherited
Sema domain0.02619Inherited
Plexin repeat0.0333Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain0.0000007832Direct
T-box0.00003348Direct
Transforming growth factor (TGF)-beta0.0002543Direct
HLH, helix-loop-helix DNA-binding domain0.0007806Direct
Forkhead DNA-binding domain0.001867Inherited
Frizzled cysteine-rich domain0.00724Inherited
Sema domain0.0207Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Homeodomain-like0.0000003521Direct
Cystine-knot cytokines0.0001955Direct
HLH, helix-loop-helix DNA-binding domain0.0003732Direct
p53-like transcription factors0.003157Inherited
Frizzled cysteine-rich domain0.005207Inherited
Snake toxin-like0.01839Inherited
Sema domain0.02091Inherited
Plexin repeat0.0268Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57196,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.0005884Direct
    101912,103575
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 0.02091Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57603,57603,57603
  • 57603 - FnI-like domain
  • 57603 - FnI-like domain
  • 57603 - FnI-like domain
  • 0.0007612Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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