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Xenopus ANatomical entity (XAN): intermediate mesoderm

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + + 3:   embryo [XAO:0000113] <8>(133|186) (135|86|36)
+ + + 3:   whole organism [XAO:0003004] <12>(450|576) (454|327|143)
+ + 2:   primary germ layer [XAO:0003011] <4>(107|154) (108|70|28)
+ + 2:   multicellular anatomical structure [XAO:0005002] <4>(437|563) (439|323|141)
+ 1:   mesoderm [XAO:0000050] <9>(28|39) (28|11|7)
+ 1:   tissue [XAO:0003040] <184>(180|249) (186|128|57)
0:   intermediate mesoderm [XAO:0000085](4|4) (4|1|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain-like0.0000001461Direct
Orange domain-like0.0000001781Direct
HLH, helix-loop-helix DNA-binding domain0.00003156Direct
"Winged helix" DNA-binding domain0.0003771Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Hairy Orange domain0.00000019Direct
Homeodomain0.000000302Direct
ets domain0.000001026Direct
HLH, helix-loop-helix DNA-binding domain0.00004262Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Homeodomain-like0.0000001022Direct
Orange domain-like0.0000001247Direct
HLH, helix-loop-helix DNA-binding domain0.00002287Direct
"Winged helix" DNA-binding domain0.0002812Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47459,158457
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 158457 - Orange domain-like
  • 0.0000001247Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)