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Xenopus ANatomical entity (XAN): endoderm

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   anatomical structure [XAO:0003000] <11>(577|733) (577|400|163)
+ + + + 4:   whole organism [XAO:0003004] <12>(461|598) (465|335|145)
+ + + 3:   multicellular anatomical structure [XAO:0005002] <4>(436|565) (440|325|142)
+ + + 3:   Xenopus anatomical entity [XAO:0000000] <9>
+ + 2:   tissue [XAO:0003040] <186>(182|250) (189|130|58)
+ + 2:   embryo [XAO:0000113] <8>(134|185) (134|89|38)
+ 1:   primary germ layer [XAO:0003011] <4>(109|155) (109|73|30)
0:   endoderm [XAO:0000090] <16>(14|13) (14|4|0)
- 1:   archenteron [XAO:0000092] <3>(5|6) (5|2|0)
- 1:   anterior endoderm [XAO:0005303](0|0) (0|0|0)
- 1:   central endoderm [XAO:0000295](0|0) (0|0|0)
- 1:   dorsal crest of the endoderm [XAO:0005045](0|0) (0|0|0)
- 1:   endodermal cell [XAO:0003248](0|0) (0|0|0)
- 1:   foregut endoderm [XAO:0004513](0|0) (0|0|0)
- 1:   head endoderm [XAO:0000091](0|0) (0|0|0)
- 1:   hindgut primordium [XAO:0004511](0|0) (0|0|0)
- 1:   hypochord [XAO:0000056](5|4) (5|0|0)
- 1:   midgut primordium [XAO:0004512](0|0) (0|0|0)
- 1:   pharyngeal endoderm [XAO:0004463](1|0) (1|0|0)
- 1:   posterior endoderm [XAO:0005302](0|0) (0|0|0)
- 1:   sub-blastoporal endoderm [XAO:0004068](0|0) (0|0|0)
- 1:   suprablastoporal endoderm [XAO:0004067](0|0) (0|0|0)
- 1:   vegetal endoderm [XAO:0004066](1|1) (1|0|0)
- 1:   ventral endoderm [XAO:0005301](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain-like0.00000000004059Direct
TIMP-like0.0000002422Direct
Cystine-knot cytokines0.00000115Direct
FnI-like domain0.00001756Direct
Frizzled cysteine-rich domain0.00002705Direct
HMG-box0.0002666Direct
Alpha-macroglobulin receptor domain0.00212Inherited
Growth factor receptor domain0.002417Inherited
Kazal-type serine protease inhibitors0.01367Inherited
TSP-1 type 1 repeat0.0211Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.03505Inherited
EGF/Laminin0.05695Inherited
Tubulin C-terminal domain-like0.141Inherited
Tubulin nucleotide-binding domain-like0.141Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain0.000000000551Direct
Erythroid transcription factor GATA-10.000001407Direct
VWC domain0.000004096Direct
Transforming growth factor (TGF)-beta0.000009038Direct
Frizzled cysteine-rich domain0.00003332Direct
Complement components0.0002723Direct
HMG-box0.0003656Direct
Alpha-macroglobulin receptor domain0.002069Inherited
Ovomucoid domain III-like0.0108Inherited
Growth factor receptor domain0.01107Inherited
TSP-1 type 1 repeat0.0257Inherited
Tubulin, GTPase domain0.1436Inherited
Tubulin, C-terminal domain0.1436Inherited


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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Homeodomain-like0.00000000002826Direct
TIMP-like0.000000171Direct
Cystine-knot cytokines0.0000008179Direct
FnI-like domain0.0000127Direct
Frizzled cysteine-rich domain0.00001967Direct
HMG-box0.000199Direct
Alpha-macroglobulin receptor domain0.001624Inherited
Growth factor receptor domain0.001855Inherited
Kazal-type serine protease inhibitors0.01077Inherited
TSP-1 type 1 repeat0.01676Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.02837Inherited
EGF/Laminin0.04693Inherited
Tubulin C-terminal domain-like0.1221Inherited
Tubulin nucleotide-binding domain-like0.1221Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
63501,50242
  • 63501 - Frizzled cysteine-rich domain
  • 50242 - TIMP-like
  • 0.000002317Direct
    50729,56112
  • 50729 - PH domain-like
  • 56112 - Protein kinase-like (PK-like)
  • 0.0003711Direct
    57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.0009565Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.1221Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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