SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Xenopus ANatomical entity (XAN): lateral line system

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + + 4:   whole organism [XAO:0003004] <12>(450|576) (454|327|143)
+ + + + 4:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + + 3:   anatomical group [XAO:0003001] <2>(374|481) (379|294|130)
+ + 2:   anatomical system [XAO:0003002] <19>(239|330) (246|188|86)
+ + 2:   nervous system [XAO:0000177] <11>(134|200) (140|113|51)
+ 1:   peripheral nervous system [XAO:0000178] <7>(13|13) (16|4|0)
+ 1:   sensory system [XAO:0003194] <5>(38|51) (43|25|10)
0:   lateral line system [XAO:0000095] <4>(1|1) (1|0|0)
- 1:   lateral line [XAO:0004002] <10>(1|1) (1|0|0)
- 1:   lateral line placode [XAO:0000440] <5>(0|0) (0|0|0)
- 1:   lateral line ganglion [XAO:0004457] <1>(1|1) (1|0|0)
- 1:   lateral line primordium [XAO:0004411] <1>(0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
HLH, helix-loop-helix DNA-binding domain0.0002322Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
HLH, helix-loop-helix DNA-binding domain0.0001921Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
HLH, helix-loop-helix DNA-binding domain0.0001721Direct


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)