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Xenopus ANatomical entity (XAN): tail bud

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   whole organism [XAO:0003004] <12>(450|576) (454|327|143)
+ + + 3:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + 2:   multicellular anatomical structure [XAO:0005002] <4>(437|563) (439|323|141)
+ + 2:   anatomical region [XAO:0003186] <43>(373|484) (375|285|122)
+ 1:   multi-tissue structure [XAO:0003037] <130>(48|62) (51|32|14)
+ 1:   tail region [XAO:0000087] <2>(29|40) (29|16|8)
0:   tail bud [XAO:0000107] <3>(7|8) (7|2|1)
- 1:   cloaca [XAO:0000244] <3>(2|2) (2|1|0)
- 1:   neurenteric canal [XAO:0005245] <1>(1|1) (1|0|0)
- 1:   chordoneural hinge [XAO:0000108](4|5) (4|1|1)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
SMAD MH1 domain0.00001175Direct
Homeodomain-like0.0000266Direct
Cytokine0.0009723Direct
Orange domain-like0.001408Inherited
HLH, helix-loop-helix DNA-binding domain0.004077Inherited
Metalloproteases ("zincins"), catalytic domain0.0903Inherited
TSP-1 type 1 repeat0.09525Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
SMAD MH1 domain0.00001146Direct
SMAD domain0.00007636Direct
Homeodomain0.00008022Direct
Fibroblast growth factors (FGF)0.0004534Direct
Hairy Orange domain0.001348Inherited
Forkhead DNA-binding domain0.002665Inherited
HLH, helix-loop-helix DNA-binding domain0.00525Inherited
TSP-1 type 1 repeat0.1123Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
SMAD MH1 domain0.000008427Direct
Homeodomain-like0.00001925Direct
Cytokine0.0007335Direct
Orange domain-like0.001069Inherited
HLH, helix-loop-helix DNA-binding domain0.003135Inherited
Metalloproteases ("zincins"), catalytic domain0.07583Inherited
TSP-1 type 1 repeat0.08044Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47459,158457
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 158457 - Orange domain-like
  • 0.001069Inherited
    82895,82895
  • 82895 - TSP-1 type 1 repeat
  • 82895 - TSP-1 type 1 repeat
  • 0.28Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48371,48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.02034Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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