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Xenopus ANatomical entity (XAN): liver and biliary system

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   whole organism [XAO:0003004] <12>(450|576) (454|327|143)
+ + + 3:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + 2:   anatomical group [XAO:0003001] <2>(374|481) (379|294|130)
+ 1:   anatomical system [XAO:0003002] <19>(239|330) (246|188|86)
+ 1:   alimentary system [XAO:0000125] <30>(64|96) (65|46|19)
0:   liver and biliary system [XAO:0000132] <5>(8|15) (10|12|4)
- 1:   liver [XAO:0000133] <3>(6|12) (7|11|4)
- 1:   bile duct [XAO:0000134](0|0) (0|0|0)
- 1:   biliary tree [XAO:0000455](0|0) (0|0|0)
- 1:   gall bladder [XAO:0000135](1|1) (1|0|0)
- 1:   hepato-pancreatic duct [XAO:0000239](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Fibrinogen coiled-coil and central regions0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
Subunits of heterodimeric actin filament capping protein Capz0Direct
Surp module (SWAP domain)0Direct
Succinyl-CoA synthetase domains0Direct
TK C-terminal domain-like0Direct
RNA-binding domain, RBD0.00005131Direct
Frizzled cysteine-rich domain0.6988Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Succinyl-CoA synthetase domains0Direct
Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain0Direct
Variant RING domain0Direct
CAT-like0Direct
HCDH C-domain-like0Direct
Ferritin0Direct
Branched-chain alpha-keto acid dehydrogenase PP module0Direct
Fibronectin type I module0Direct
Surp module (SWAP domain)0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
Fibrinogen coiled-coil and central regions0Direct
Canonical RBD0.00001973Direct
Crotonase-like0.000343Direct
Complement components0.0005781Direct
Frizzled cysteine-rich domain0.7025Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Succinyl-CoA synthetase domains0Direct
Subunits of heterodimeric actin filament capping protein Capz0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
TK C-terminal domain-like0Direct
Surp module (SWAP domain)0Direct
Fibrinogen coiled-coil and central regions0Direct
RNA-binding domain, RBD0.00003739Direct
Thiamin diphosphate-binding fold (THDP-binding)0.0009951Direct
Alpha-macroglobulin receptor domain0.001582Inherited
Frizzled cysteine-rich domain0.6623Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48371,46785
  • 48371 - ARM repeat
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    53300,81995
  • 53300 - vWA-like
  • 81995 - beta-sandwich domain of Sec23/24
  • 0Direct
    81995,81811
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
  • 0Direct
    57603,57440
  • 57603 - FnI-like domain
  • 57440 - Kringle-like
  • 0Direct
    51230,47005
  • 51230 - Single hybrid motif
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 0Direct
    54403,54403
  • 54403 - Cystatin/monellin
  • 54403 - Cystatin/monellin
  • 0Direct
    52518,52922
  • 52518 - Thiamin diphosphate-binding fold (THDP-binding)
  • 52922 - TK C-terminal domain-like
  • 0Direct
    82895,57424
  • 82895 - TSP-1 type 1 repeat
  • 57424 - LDL receptor-like module
  • 0Direct
    56059,52210
  • 56059 - Glutathione synthetase ATP-binding domain-like
  • 52210 - Succinyl-CoA synthetase domains
  • 0Direct
    57196,50494
  • 57196 - EGF/Laminin
  • 50494 - Trypsin-like serine proteases
  • 0Direct
    47005,52777
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 52777 - CoA-dependent acyltransferases
  • 0Direct
    54928,54928
  • 54928 - RNA-binding domain, RBD
  • 54928 - RNA-binding domain, RBD
  • 0.0001584Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57196,49854,57535
  • 57196 - EGF/Laminin
  • 49854 - Spermadhesin, CUB domain
  • 57535 - Complement control module/SCR domain
  • 0Direct
    51230,47005,52777
  • 51230 - Single hybrid motif
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 52777 - CoA-dependent acyltransferases
  • 0Direct
    81995,81811,82754
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
  • 0Direct
    53300,81995,81811
  • 53300 - vWA-like
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
  • 0Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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