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Xenopus ANatomical entity (XAN): thymus

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   whole organism [XAO:0003004] <12>(450|576) (454|327|143)
+ + + 3:   anatomical group [XAO:0003001] <2>(374|481) (379|294|130)
+ + + 3:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + 2:   anatomical system [XAO:0003002] <19>(239|330) (246|188|86)
+ + 2:   multicellular anatomical structure [XAO:0005002] <4>(437|563) (439|323|141)
+ 1:   compound organ [XAO:0003041] <8>(334|444) (336|276|123)
+ 1:   immune system [XAO:0003152] <9>(12|12) (12|4|3)
+ 1:   endocrine system [XAO:0000158] <10>(13|14) (13|4|3)
0:   thymus [XAO:0000163] <1>(11|11) (11|4|3)
- 1:   thymocyte [XAO:0003159](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Cu,Zn superoxide dismutase-like0Direct
Subunits of heterodimeric actin filament capping protein Capz0Direct
LeuD/IlvD-like0Direct
Aconitase iron-sulfur domain0Direct
RNA-binding domain, RBD0.00000000003356Direct
Translation proteins SH3-like domain0.000008121Direct
GroEL equatorial domain-like0.0001464Direct
GroEL-intermediate domain like0.0003103Direct
GroEL apical domain-like0.0005699Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.0007462Direct
14-3-3 protein0.0008021Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Cu,Zn superoxide dismutase-like0Direct
Ferritin0Direct
Aconitase iron-sulfur domain0Direct
LeuD-like0Direct
Group II chaperonin (CCT, TRIC), intermediate domain0Direct
Canonical RBD0.000000000001596Direct
Proteasome subunits0.000002513Direct
Group II chaperonin (CCT, TRIC), apical domain0.00004302Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.00008895Direct
Papain-like0.0001271Direct
14-3-3 protein0.0007249Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
LeuD/IlvD-like0Direct
Subunits of heterodimeric actin filament capping protein Capz0Direct
Cu,Zn superoxide dismutase-like0Direct
Aconitase iron-sulfur domain0Direct
RNA-binding domain, RBD0.0000000000232Direct
Translation proteins SH3-like domain0.000005808Direct
GroEL equatorial domain-like0.0001079Direct
GroEL-intermediate domain like0.000231Direct
GroEL apical domain-like0.0004273Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.0005609Direct
14-3-3 protein0.0006036Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
53732,52016
  • 53732 - Aconitase iron-sulfur domain
  • 52016 - LeuD/IlvD-like
  • 0Direct
    54928,54928
  • 54928 - RNA-binding domain, RBD
  • 54928 - RNA-binding domain, RBD
  • 0.0000003062Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.0001427Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0008694Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    50729,55550,56112
  • 50729 - PH domain-like
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0Direct
    55550,56112,56112
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 56112 - Protein kinase-like (PK-like)
  • 0Direct
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0001427Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)