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Xenopus ANatomical entity (XAN): bone tissue

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + + + 5:   anatomical system [XAO:0003002] <19>(285|379) (290|203|91)
+ + + + + 5:   anatomical group [XAO:0003001] <2>(418|530) (420|307|132)
+ + + + + 5:   musculoskeletal system [XAO:0000168] <2>(43|60) (46|26|15)
+ + + + + 5:   whole organism [XAO:0003004] <12>(463|595) (466|331|144)
+ + + + + 5:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + + + 4:   skeletal system [XAO:0003060] <3>(16|18) (17|7|4)
+ + + + 4:   anatomical cluster [XAO:0003160] <43>(93|140) (96|75|38)
+ + + + 4:   compound organ [XAO:0003041] <8>(335|444) (336|275|123)
+ + + + 4:   multicellular anatomical structure [XAO:0005002] <4>(437|563) (439|321|141)
+ + + 3:   solid compound organ [XAO:0003164] <3>(22|34) (25|20|9)
+ + + 3:   skeleton [XAO:0004053] <3>(12|9) (13|4|2)
+ + + 3:   tissue [XAO:0003040] <186>(180|249) (187|128|57)
+ + 2:   skeletal element [XAO:0004012] <8>(11|9) (12|4|2)
+ + 2:   connective tissue [XAO:0001017] <9>(10|8) (11|2|0)
+ 1:   skeletal tissue [XAO:0004038] <5>(10|8) (11|2|0)
+ 1:   bone element [XAO:0004276] <9>(9|7) (10|4|2)
0:   bone tissue [XAO:0000169] <3>(8|6) (9|2|0)
- 1:   mineralized bone tissue [XAO:0004040] <2>(0|0) (0|0|0)
- 1:   periosteum [XAO:0004503] <2>(0|0) (0|0|0)
- 1:   osteoid [XAO:0004035] <1>(0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Subunits of heterodimeric actin filament capping protein Capz0Direct
F1F0 ATP synthase subunit C0Direct
Thioredoxin-like0.00001331Direct
Actin depolymerizing proteins0.00008615Direct
Zn-binding ribosomal proteins0.00008649Direct
Translation proteins SH3-like domain0.0002151Direct
LDH C-terminal domain-like0.0005225Direct
Annexin0.0009566Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
DJ-1/PfpI0Direct
F1F0 ATP synthase subunit C0Direct
Linker histone H1/H50.0005261Direct
LDH N-terminal domain-like0.0005261Direct
Lactate & malate dehydrogenases, C-terminal domain0.0005261Direct
Glutathione peroxidase-like0.0006187Direct


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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
F1F0 ATP synthase subunit C0Direct
Subunits of heterodimeric actin filament capping protein Capz0Direct
Thioredoxin-like0.000009646Direct
Actin depolymerizing proteins0.00006361Direct
Zn-binding ribosomal proteins0.00006387Direct
Translation proteins SH3-like domain0.0001606Direct
LDH C-terminal domain-like0.0003943Direct
Annexin0.0007267Direct
UBC-like0.0007633Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47095,47095
  • 47095 - HMG-box
  • 47095 - HMG-box
  • 0.0003943Direct
    51735,56327
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 56327 - LDH C-terminal domain-like
  • 0.0003943Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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