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Xenopus ANatomical entity (XAN): muscle

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   whole organism [XAO:0003004] <12>(461|598) (465|335|145)
+ + + 3:   anatomical group [XAO:0003001] <2>(414|530) (418|309|134)
+ + + 3:   anatomical structure [XAO:0003000] <11>(577|733) (577|400|163)
+ + 2:   musculoskeletal system [XAO:0000168] <2>(44|60) (47|28|16)
+ + 2:   anatomical system [XAO:0003002] <19>(283|382) (289|204|93)
+ + 2:   multicellular anatomical structure [XAO:0005002] <4>(436|565) (440|325|142)
+ 1:   muscular system [XAO:0004042] <4>(28|40) (31|19|9)
+ 1:   tissue [XAO:0003040] <186>(182|250) (189|130|58)
0:   muscle [XAO:0000172] <10>(20|26) (23|11|4)
- 1:   cranial muscle [XAO:0004322] <12>(3|4) (3|1|0)
- 1:   skeletal muscle [XAO:0000174] <5>(16|18) (19|10|3)
- 1:   myocyte [XAO:0004475] <3>(3|2) (3|1|0)
- 1:   myocardium [XAO:0000065] <1>(2|4) (2|0|0)
- 1:   smooth muscle [XAO:0000175] <1>(0|0) (0|0|0)
- 1:   iliofibularis [XAO:0005069](0|0) (0|0|0)
- 1:   m. rectus abdominis [XAO:0004128](0|0) (0|0|0)
- 1:   musculature of face [XAO:0001013](2|3) (2|1|0)
- 1:   pericardial muscle [XAO:0004183](0|0) (0|0|0)
- 1:   secondary myofiber [XAO:0005077](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
HSP90 C-terminal domain0Direct
SRF-like0Direct
GroEL-intermediate domain like0.000002318Direct
GroEL equatorial domain-like0.000002318Direct
GroEL apical domain-like0.00001861Direct
Translation proteins SH3-like domain0.0001169Direct
Acyl-CoA dehydrogenase C-terminal domain-like0.0005618Direct
Acyl-CoA dehydrogenase NM domain-like0.0005618Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.002152Inherited
Zn-binding ribosomal proteins0.002233Inherited
HSP20-like chaperones0.002991Inherited
Actin-like ATPase domain0.003544Inherited
Thiolase-like0.003579Inherited
Heat shock protein 70kD (HSP70), peptide-binding domain0.004097Inherited
Myosin rod fragments0.01848Inherited
Tropomyosin0.02424Inherited
EF-hand0.07467Inherited
PYP-like sensor domain (PAS domain)0.1323Inherited
HLH, helix-loop-helix DNA-binding domain0.3487Inherited
p53-like transcription factors0.952Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Group II chaperonin (CCT, TRIC), intermediate domain0Direct
SRF-like0Direct
GABARAP-like0Direct
HSP90 C-terminal domain0Direct
Heat shock protein 90, HSP90, N-terminal domain0Direct
Hsp90 middle domain0Direct
Malic enzyme N-domain0Direct
Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains0.000004066Direct
Medium chain acyl-CoA dehydrogenase-like, C-terminal domain0.000004066Direct
Group II chaperonin (CCT, TRIC), apical domain0.00001227Direct
Proteasome subunits0.00001804Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.00005946Direct
Actin/HSP700.00007672Direct
Thiolase-related0.0005923Direct
Translational machinery components0.0005923Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.003829Inherited
Parvalbumin0.006558Inherited
Tropomyosin0.009382Inherited
Hypoxia-inducible factor Hif2a, C-terminal domain0.01396Inherited
Myosin rod fragments0.01756Inherited
28-residue LRR0.08246Inherited
Erythroid transcription factor GATA-10.1364Inherited
HLH, helix-loop-helix DNA-binding domain0.3733Inherited
T-box0.4762Inherited
Forkhead DNA-binding domain0.7369Inherited
Motor proteins0.753Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
HSP90 C-terminal domain0Direct
SRF-like0Direct
GroEL-intermediate domain like0.000001657Direct
GroEL equatorial domain-like0.000001657Direct
GroEL apical domain-like0.00001348Direct
Translation proteins SH3-like domain0.00008634Direct
Acyl-CoA dehydrogenase NM domain-like0.0004232Direct
Acyl-CoA dehydrogenase C-terminal domain-like0.0004232Direct
LDH C-terminal domain-like0.001088Inherited
Pentein0.001088Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.001649Inherited
Zn-binding ribosomal proteins0.001713Inherited
HSP20-like chaperones0.002303Inherited
Actin-like ATPase domain0.002726Inherited
Thiolase-like0.002754Inherited
Heat shock protein 70kD (HSP70), peptide-binding domain0.003165Inherited
Translation proteins0.00448Inherited
Myosin rod fragments0.01462Inherited
Tropomyosin0.01934Inherited
EF-hand0.06219Inherited
PYP-like sensor domain (PAS domain)0.1142Inherited
HLH, helix-loop-helix DNA-binding domain0.3183Inherited
p53-like transcription factors0.9239Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
90257,90257
  • 90257 - Myosin rod fragments
  • 90257 - Myosin rod fragments
  • 0Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0Direct
    48371,46785
  • 48371 - ARM repeat
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.000008528Direct
    56645,47203
  • 56645 - Acyl-CoA dehydrogenase NM domain-like
  • 47203 - Acyl-CoA dehydrogenase C-terminal domain-like
  • 0.0004232Direct
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.0007507Direct
    51735,56327
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 56327 - LDH C-terminal domain-like
  • 0.001088Inherited
    100920,100934
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.001713Inherited
    53901,53901
  • 53901 - Thiolase-like
  • 53901 - Thiolase-like
  • 0.002754Inherited
    53067,100920
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.003165Inherited
    54928,54928
  • 54928 - RNA-binding domain, RBD
  • 54928 - RNA-binding domain, RBD
  • 0.005665Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    90257,90257,90257
  • 90257 - Myosin rod fragments
  • 90257 - Myosin rod fragments
  • 90257 - Myosin rod fragments
  • 0Direct
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0Direct
    53067,100920,100934
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.001713Inherited
    53067,53067,100920
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.003165Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)