SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Xenopus ANatomical entity (XAN): foregut

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   anatomical group [XAO:0003001] <2>(374|481) (379|294|130)
+ + + 3:   Xenopus anatomical entity [XAO:0000000] <9>
+ + 2:   whole organism [XAO:0003004] <12>(450|576) (454|327|143)
+ + 2:   anatomical system [XAO:0003002] <19>(239|330) (246|188|86)
+ + 2:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + 2:   embryo [XAO:0000113] <8>(133|186) (135|86|36)
+ 1:   alimentary system [XAO:0000125] <30>(64|96) (65|46|19)
+ 1:   embryonic structure [XAO:0003042] <57>(42|55) (44|26|12)
0:   foregut [XAO:0000232] <10>(8|8) (9|1|0)
- 1:   stomach [XAO:0000128] <2>(4|4) (4|0|0)
- 1:   lung bud [XAO:0005140] <1>(1|0) (1|0|0)
- 1:   lung primordium [XAO:0001002] <1>(1|0) (1|0|0)
- 1:   anterior foregut [XAO:0005127](0|0) (0|0|0)
- 1:   dorsal foregut [XAO:0005126](0|0) (0|0|0)
- 1:   gall bladder [XAO:0000135](1|1) (1|0|0)
- 1:   hepato-pancreatic progenitor cell [XAO:0004270](0|0) (0|0|0)
- 1:   liver diverticulum [XAO:0000101](1|1) (2|0|0)
- 1:   posterior foregut [XAO:0005128](0|0) (0|0|0)
- 1:   ventral foregut [XAO:0005125](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain-like0.000000001445Direct
Frizzled cysteine-rich domain0.0000004618Direct
HLH, helix-loop-helix DNA-binding domain0.0002717Direct
p53-like transcription factors0.0003308Direct
TIMP-like0.0004233Direct
Alpha-macroglobulin receptor domain0.0006364Direct
Glucocorticoid receptor-like (DNA-binding domain)0.001663Inherited
"Winged helix" DNA-binding domain0.0691Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain0.0000000002357Direct
Frizzled cysteine-rich domain0.000000687Direct
T-box0.00001585Direct
Glutathione peroxidase-like0.00005649Direct
HLH, helix-loop-helix DNA-binding domain0.0004746Direct
Alpha-macroglobulin receptor domain0.0006442Direct
Erythroid transcription factor GATA-10.001744Inherited
Forkhead DNA-binding domain0.005209Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Homeodomain-like0.000000001002Direct
Frizzled cysteine-rich domain0.0000003249Direct
HLH, helix-loop-helix DNA-binding domain0.0002019Direct
p53-like transcription factors0.0002463Direct
TIMP-like0.0003163Direct
Alpha-macroglobulin receptor domain0.0004774Direct
Glucocorticoid receptor-like (DNA-binding domain)0.001266Inherited
"Winged helix" DNA-binding domain0.05722Inherited
E set domains0.2692Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
63501,50242
  • 63501 - Frizzled cysteine-rich domain
  • 50242 - TIMP-like
  • 0.000007559Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)