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Xenopus ANatomical entity (XAN): lateral plate mesoderm

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   multicellular anatomical structure [XAO:0005002] <4>(437|563) (439|323|141)
+ + + 3:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   tissue [XAO:0003040] <184>(180|248) (186|128|57)
+ + 2:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + 2:   primary germ layer [XAO:0003011] <4>(107|153) (108|70|28)
+ + 2:   embryo [XAO:0000113] <8>(133|186) (135|86|36)
+ + 2:   whole organism [XAO:0003004] <12>(450|576) (454|327|143)
+ 1:   mesoderm [XAO:0000050] <9>(28|39) (28|11|7)
+ 1:   embryonic structure [XAO:0003042] <57>(42|55) (44|27|12)
0:   lateral plate mesoderm [XAO:0000311] <6>(10|12) (10|3|1)
- 1:   anterior dorsal lateral plate region [XAO:0003051] <1>(4|5) (4|1|0)
- 1:   filter chamber [XAO:0000439] <1>(0|0) (0|0|0)
- 1:   dorsal lateral plate mesoderm [XAO:0004509](1|1) (1|0|0)
- 1:   somatic layer of lateral plate mesoderm [XAO:0000271](0|0) (0|0|0)
- 1:   splanchnic layer of lateral plate mesoderm [XAO:0000276](1|1) (1|1|1)
- 1:   ventral mesoderm [XAO:0004473](2|2) (2|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Frizzled cysteine-rich domain0.00008432Direct
Snake toxin-like0.0001258Direct
Orange domain-like0.0007677Direct
Homeodomain-like0.0007701Direct
Globin-like0.001165Inherited
beta-beta-alpha zinc fingers0.006286Inherited
GroEL apical domain-like0.009873Inherited
GroEL-intermediate domain like0.009873Inherited
GroEL equatorial domain-like0.009873Inherited
Cystine-knot cytokines0.02264Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Erythroid transcription factor GATA-10.000001778Direct
ets domain0.00003918Direct
Frizzled cysteine-rich domain0.0000918Direct
Extracellular domain of cell surface receptors0.0001283Direct
Pointed domain0.0007007Direct
Hairy Orange domain0.0007273Direct
Globins0.00127Inherited
Classic zinc finger, C2H20.002747Inherited
Group II chaperonin (CCT, TRIC), apical domain0.003315Inherited
Group II chaperonin (CCT, TRIC), intermediate domain0.003672Inherited
Transforming growth factor (TGF)-beta0.01178Inherited
Group II chaperonin (CCT, TRIC), ATPase domain0.01411Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Frizzled cysteine-rich domain0.00006171Direct
Snake toxin-like0.0000925Direct
Orange domain-like0.0005774Direct
Homeodomain-like0.0005793Direct
Globin-like0.0008823Direct
beta-beta-alpha zinc fingers0.004872Inherited
GroEL-intermediate domain like0.007706Inherited
GroEL apical domain-like0.007706Inherited
GroEL equatorial domain-like0.007706Inherited
Cystine-knot cytokines0.018Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.0002747Direct
    47459,158457
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 158457 - Orange domain-like
  • 0.0005774Direct
    57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.0008961Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57667,57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.07089Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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