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Xenopus ANatomical entity (XAN): lateral plate mesoderm

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   multicellular anatomical structure [XAO:0005002] <4>(436|565) (440|325|142)
+ + + 3:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   tissue [XAO:0003040] <186>(182|250) (189|130|58)
+ + 2:   primary germ layer [XAO:0003011] <4>(109|155) (109|73|30)
+ + 2:   embryo [XAO:0000113] <8>(134|185) (134|89|38)
+ + 2:   anatomical structure [XAO:0003000] <11>(577|733) (577|400|163)
+ + 2:   whole organism [XAO:0003004] <12>(461|598) (465|335|145)
+ 1:   embryonic structure [XAO:0003042] <58>(42|52) (43|27|13)
+ 1:   mesoderm [XAO:0000050] <9>(28|38) (28|13|8)
0:   lateral plate mesoderm [XAO:0000311] <6>(9|11) (10|3|1)
- 1:   anterior dorsal lateral plate region [XAO:0003051] <1>(4|4) (4|1|0)
- 1:   filter chamber [XAO:0000439] <1>(0|0) (0|0|0)
- 1:   dorsal lateral plate mesoderm [XAO:0004509](0|1) (1|0|0)
- 1:   somatic layer of lateral plate mesoderm [XAO:0000271](0|0) (0|0|0)
- 1:   splanchnic layer of lateral plate mesoderm [XAO:0000276](1|1) (1|1|1)
- 1:   ventral mesoderm [XAO:0004473](2|2) (2|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Frizzled cysteine-rich domain0.0001043Direct
Snake toxin-like0.0001481Direct
Orange domain-like0.0008642Direct
Globin-like0.001291Inherited
beta-beta-alpha zinc fingers0.008699Inherited
GroEL-intermediate domain like0.01082Inherited
GroEL apical domain-like0.01082Inherited
GroEL equatorial domain-like0.01082Inherited
Cystine-knot cytokines0.034Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Erythroid transcription factor GATA-10.000002005Direct
ets domain0.00004757Direct
Frizzled cysteine-rich domain0.000111Direct
Extracellular domain of cell surface receptors0.0001434Direct
Pointed domain0.0007672Direct
Hairy Orange domain0.0008097Direct
Globins0.001392Inherited
Classic zinc finger, C2H20.003587Inherited
Group II chaperonin (CCT, TRIC), apical domain0.003613Inherited
Group II chaperonin (CCT, TRIC), intermediate domain0.003939Inherited
Transforming growth factor (TGF)-beta0.01882Inherited


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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Frizzled cysteine-rich domain0.00007702Direct
Snake toxin-like0.0001096Direct
Orange domain-like0.0006547Direct
Globin-like0.000983Direct
Homeodomain-like0.0009856Direct
beta-beta-alpha zinc fingers0.006799Inherited
GroEL-intermediate domain like0.008493Inherited
GroEL equatorial domain-like0.008493Inherited
GroEL apical domain-like0.008493Inherited
Cystine-knot cytokines0.02748Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.0004055Direct
    47459,158457
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 158457 - Orange domain-like
  • 0.0006547Direct
    57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.001138Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57667,57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.08157Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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