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Xenopus ANatomical entity (XAN): neuron

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   anatomical group [XAO:0003001] <2>(374|481) (379|294|130)
+ + 2:   whole organism [XAO:0003004] <12>(450|576) (454|327|143)
+ + 2:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + 2:   anatomical system [XAO:0003002] <19>(239|330) (246|188|86)
+ 1:   nervous system [XAO:0000177] <11>(134|200) (140|113|51)
+ 1:   cell [XAO:0003012] <70>(92|101) (93|35|16)
0:   neuron [XAO:0003023] <18>(10|12) (11|3|1)
- 1:   interneuron [XAO:0004267] <6>(0|0) (0|0|0)
- 1:   axon [XAO:0005015] <1>(2|2) (2|0|0)
- 1:   motor neuron [XAO:0004217] <1>(0|0) (0|0|0)
- 1:   Mauthner cell [XAO:0005035](0|0) (0|0|0)
- 1:   Rohon-Beard neuron [XAO:0003022](1|1) (1|0|0)
- 1:   afferent neuron [XAO:0005229](0|0) (0|0|0)
- 1:   dendrite [XAO:0005016](0|0) (0|0|0)
- 1:   dorsolateral ascending neuron [XAO:0005184](0|0) (0|0|0)
- 1:   dorsolateral commissural neuron [XAO:0005185](0|0) (0|0|0)
- 1:   efferent neuron [XAO:0005228](0|0) (0|0|0)
- 1:   enteric neuron [XAO:0004523](0|0) (0|0|0)
- 1:   growth cone [XAO:0005010](0|0) (0|0|0)
- 1:   horizontal cell [XAO:0004097](0|0) (0|0|0)
- 1:   intersomitic neuron [XAO:0004078](2|2) (2|1|0)
- 1:   mitral cell [XAO:0004573](0|0) (0|0|0)
- 1:   olfactory sensory neuron [XAO:0004527](1|2) (2|1|0)
- 1:   retinal ganglion cell [XAO:0004100](1|1) (1|0|0)
- 1:   spinal neuron [XAO:0005018](3|3) (3|1|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain-like0.000000000003092Direct
Tubulin C-terminal domain-like0.000000002531Direct
Tubulin nucleotide-binding domain-like0.000000002531Direct
HLH, helix-loop-helix DNA-binding domain0.00000002917Direct
Intermediate filament protein, coiled coil region0.000000638Direct
Voltage-gated potassium channels0.0001344Direct
lambda repressor-like DNA-binding domains0.0004426Direct
p53-like transcription factors0.0008864Direct
Transducin (alpha subunit), insertion domain0.001343Inherited
POZ domain0.03668Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain0.0000000000005985Direct
Tubulin, GTPase domain0.000000003891Direct
Tubulin, C-terminal domain0.000000003891Direct
HLH, helix-loop-helix DNA-binding domain0.000000066Direct
Intermediate filament protein, coiled coil region0.000000974Direct
Tetramerization domain of potassium channels0.000007833Direct
Voltage-gated potassium channels0.00003846Direct
POU-specific domain0.00007538Direct
Paired domain0.0001213Direct
Enabled/VASP homology 1 domain (EVH1 domain)0.0009763Direct
Transducin (alpha subunit), insertion domain0.001406Inherited
G proteins0.6109Inherited


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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Homeodomain-like0.000000000002133Direct
Tubulin nucleotide-binding domain-like0.000000001757Direct
Tubulin C-terminal domain-like0.000000001757Direct
HLH, helix-loop-helix DNA-binding domain0.00000002034Direct
Intermediate filament protein, coiled coil region0.0000004493Direct
Voltage-gated potassium channels0.00009888Direct
lambda repressor-like DNA-binding domains0.0003309Direct
p53-like transcription factors0.000668Direct
Transducin (alpha subunit), insertion domain0.001019Inherited
POZ domain0.02966Inherited
P-loop containing nucleoside triphosphate hydrolases1Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.000000001757Direct
    47413,46689
  • 47413 - lambda repressor-like DNA-binding domains
  • 46689 - Homeodomain-like
  • 0.00007788Direct
    47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.001019Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    49899,49899,49899
  • 49899 - Concanavalin A-like lectins/glucanases
  • 49899 - Concanavalin A-like lectins/glucanases
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0.0006403Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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