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Xenopus ANatomical entity (XAN): viscus

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + + 3:   multicellular anatomical structure [XAO:0005002] <4>(437|563) (439|323|141)
+ + + 3:   whole organism [XAO:0003004] <12>(450|576) (454|327|143)
+ + + 3:   anatomical region [XAO:0003186] <43>(373|484) (375|285|122)
+ + 2:   trunk region [XAO:0000054] <1>(216|301) (217|156|81)
+ + 2:   anatomical group [XAO:0003001] <2>(374|481) (379|294|130)
+ + 2:   organism subdivision [XAO:0003013] <11>(378|498) (383|292|125)
+ 1:   anatomical cluster [XAO:0003160] <43>(93|139) (97|75|38)
+ 1:   trunk [XAO:0003025] <10>(215|300) (216|156|81)
0:   viscus [XAO:0003034] <9>(64|96) (67|45|21)
- 1:   heart [XAO:0000064] <18>(14|15) (16|6|4)
- 1:   intestine [XAO:0000129] <5>(25|42) (25|16|7)
- 1:   liver [XAO:0000133] <3>(6|12) (7|11|4)
- 1:   pancreas [XAO:0000136] <3>(9|9) (9|7|1)
- 1:   stomach [XAO:0000128] <2>(4|4) (4|0|0)
- 1:   lung [XAO:0000119] <1>(0|0) (0|0|0)
- 1:   bladder [XAO:0000154](0|0) (0|0|0)
- 1:   gall bladder [XAO:0000135](1|1) (1|0|0)
- 1:   spleen [XAO:0000328](1|0) (1|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
SCP-like0Direct
Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain0Direct
Amidase signature (AS) enzymes0Direct
Hedgehog/DD-peptidase0Direct
MAPEG domain-like0Direct
N-acetylmuramoyl-L-alanine amidase-like0Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0Direct
PLP-binding barrel0Direct
Delta-sleep-inducing peptide immunoreactive peptide0Direct
Isocitrate/Isopropylmalate dehydrogenase-like0Direct
Surp module (SWAP domain)0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
TK C-terminal domain-like0Direct
AraD/HMP-PK domain-like0Direct
eIF1-like0Direct
Mannose 6-phosphate receptor domain0Direct
Guanido kinase N-terminal domain0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Alanine racemase C-terminal domain-like0Direct
PAH2 domain0Direct
Subunits of heterodimeric actin filament capping protein Capz0Direct
Thiolase-like0Direct
4Fe-4S ferredoxins0Direct
Aminomethyltransferase beta-barrel domain0Direct
TGS-like0Direct
NAP-like0Direct
Moesin tail domain0Direct
ACP-like0Direct
Glutamine synthetase/guanido kinase0Direct
Apolipoprotein A-I0Direct
Fibrinogen coiled-coil and central regions0Direct
Succinyl-CoA synthetase domains0Direct
F1F0 ATP synthase subunit C0Direct
Lipovitellin-phosvitin complex, superhelical domain0Direct
BSD domain-like0Direct
NAD(P)-binding Rossmann-fold domains0.001617Inherited
ALDH-like0.001726Inherited
PLP-dependent transferases0.007646Inherited
RNA-binding domain, RBD0.0157Inherited
Trypsin-like serine proteases0.03293Inherited
Thiamin diphosphate-binding fold (THDP-binding)0.03691Inherited
Translation proteins SH3-like domain0.05259Inherited
Translational machinery components0.07416Inherited
Leukotriene A4 hydrolase N-terminal domain0.07458Inherited
SMAD MH1 domain0.1445Inherited
SMAD/FHA domain0.1477Inherited
WD40 repeat-like0.1506Inherited
Actin-like ATPase domain0.1857Inherited
MHC antigen-recognition domain0.2712Inherited
Zn-binding ribosomal proteins0.3008Inherited
HMG-box0.3195Inherited
"Winged helix" DNA-binding domain0.4245Inherited
EGF/Laminin0.4695Inherited
Troponin coil-coiled subunits0.5524Inherited
p53-like transcription factors0.7441Inherited
Snake toxin-like0.8216Inherited
Homeodomain-like1Inherited
Immunoglobulin1Inherited
Growth factor receptor domain1Inherited
Frizzled cysteine-rich domain1Inherited
HLH, helix-loop-helix DNA-binding domain1Inherited
Cystine-knot cytokines1Inherited
Tropomyosin1Inherited
EF-hand1Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Arginase-like amidino hydrolases0Direct
Succinyl-CoA synthetase domains0Direct
Guanido kinase N-terminal domain0Direct
Glyoxalase II (hydroxyacylglutathione hydrolase)0Direct
Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain0Direct
Alanine racemase-like, N-terminal domain0Direct
eIF1-like0Direct
Chromo barrel domain0Direct
Sterol carrier protein, SCP0Direct
Delta-sleep-inducing peptide immunoreactive peptide0Direct
Transferrin0Direct
GABARAP-like0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
PDI-like0Direct
BSD domain0Direct
Noncollagenous (NC1) domain of collagen IV0Direct
Dimeric isocitrate & isopropylmalate dehydrogenases0Direct
Apolipoprotein A-I0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Variant RING domain0Direct
Troponin I0Direct
RuBisCo LSMT catalytic domain0Direct
HAT/Suf repeat0Direct
Mannose 6-phosphate receptor domain0Direct
Ferritin0Direct
CAT-like0Direct
Fibronectin type I module0Direct
UDPGT-like0Direct
D-aminoacid oxidase-like0Direct
Aminomethyltransferase beta-barrel domain0Direct
Steroid-binding domain0Direct
N-acetylmuramoyl-L-alanine amidase-like0Direct
gamma-adaptin C-terminal appendage domain-like0Direct
Surp module (SWAP domain)0Direct
PAH2 domain0Direct
alpha-catenin/vinculin0Direct
MSP-like0Direct
Lipovitellin-phosvitin complex, superhelical domain0Direct
NAP-like0Direct
IP3 receptor type 1 binding core, domain 20Direct
Guanido kinase catalytic domain0Direct
Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain0Direct
Fibronectin type II module0Direct
Anticodon-binding domain of Class II aaRS0Direct
Amidase signature (AS) enzymes0Direct
S-adenosylhomocystein hydrolase0Direct
Pumilio repeat0Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0Direct
Phosphoribosylpyrophosphate synthetase-like0Direct
Eukaryotic ODC-like0Direct
Thiolase-related0Direct
Protein-L-isoaspartyl O-methyltransferase0Direct
Threonyl-tRNA synthetase (ThrRS), second 'additional' domain0Direct
F1F0 ATP synthase subunit C0Direct
Moesin tail domain0Direct
Group II chaperonin (CCT, TRIC), intermediate domain0Direct
DNA ligase0Direct
Hypoxia-inducible factor HIF ihhibitor (FIH1)0Direct
Alpha-adaptin ear subdomain-like0Direct
Clathrin adaptor appendage, alpha and beta chain-specific domain0Direct
HCDH C-domain-like0Direct
Neurolysin-like0Direct
Malic enzyme N-domain0Direct
Fibrinogen coiled-coil and central regions0Direct
MAPEG domain0Direct
AraD-like aldolase/epimerase0Direct
Hedgehog (development protein), N-terminal signaling domain0Direct
Branched-chain alpha-keto acid dehydrogenase PP module0Direct
Crotonase-like0Direct
Canonical RBD0.001311Inherited
ALDH-like0.001577Inherited
GABA-aminotransferase-like0.002246Inherited
Leukotriene A4 hydrolase N-terminal domain0.01276Inherited
Eukaryotic proteases0.03616Inherited
Class I aldolase0.03858Inherited
Actin/HSP700.08977Inherited
Leukotriene A4 hydrolase catalytic domain0.09851Inherited
SMAD domain0.09851Inherited
Complement components0.1373Inherited
SMAD MH1 domain0.1373Inherited
Erythroid transcription factor GATA-10.1947Inherited
MHC antigen-recognition domain0.2591Inherited
WD40-repeat0.2784Inherited
HMG-box0.3348Inherited
LIM domain0.3483Inherited
Lectin leg-like0.3523Inherited
Translational machinery components0.6621Inherited
Calmodulin-like0.8156Inherited
T-box0.8826Inherited
Forkhead DNA-binding domain0.9761Inherited
Frizzled cysteine-rich domain0.9901Inherited
Transforming growth factor (TGF)-beta1Inherited
Growth factor receptor domain1Inherited
Homeodomain1Inherited
HLH, helix-loop-helix DNA-binding domain1Inherited
Tropomyosin1Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Aminomethyltransferase beta-barrel domain0Direct
Moesin tail domain0Direct
Mannose 6-phosphate receptor domain0Direct
Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain0Direct
BSD domain-like0Direct
Amidase signature (AS) enzymes0Direct
MAPEG domain-like0Direct
Apolipoprotein A-I0Direct
PLP-binding barrel0Direct
Succinyl-CoA synthetase domains0Direct
ACP-like0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
Lipovitellin-phosvitin complex, superhelical domain0Direct
SCP-like0Direct
TK C-terminal domain-like0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Isocitrate/Isopropylmalate dehydrogenase-like0Direct
Surp module (SWAP domain)0Direct
Thiolase-like0Direct
NAP-like0Direct
Delta-sleep-inducing peptide immunoreactive peptide0Direct
eIF1-like0Direct
PAH2 domain0Direct
F1F0 ATP synthase subunit C0Direct
Glutamine synthetase/guanido kinase0Direct
Alanine racemase C-terminal domain-like0Direct
Subunits of heterodimeric actin filament capping protein Capz0Direct
Fibrinogen coiled-coil and central regions0Direct
TGS-like0Direct
4Fe-4S ferredoxins0Direct
Guanido kinase N-terminal domain0Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0Direct
N-acetylmuramoyl-L-alanine amidase-like0Direct
AraD/HMP-PK domain-like0Direct
Hedgehog/DD-peptidase0Direct
NAD(P)-binding Rossmann-fold domains0.001231Inherited
ALDH-like0.001315Inherited
PLP-dependent transferases0.005945Inherited
RNA-binding domain, RBD0.01236Inherited
Trypsin-like serine proteases0.0265Inherited
Thiamin diphosphate-binding fold (THDP-binding)0.02987Inherited
Translation proteins SH3-like domain0.04314Inherited
Translational machinery components0.06165Inherited
Leukotriene A4 hydrolase N-terminal domain0.06204Inherited
Orange domain-like0.08867Inherited
SMAD MH1 domain0.1254Inherited
SMAD/FHA domain0.1283Inherited
WD40 repeat-like0.1309Inherited
Actin-like ATPase domain0.1631Inherited
Alpha-macroglobulin receptor domain0.1752Inherited
MHC antigen-recognition domain0.2437Inherited
Zn-binding ribosomal proteins0.2721Inherited
HMG-box0.2897Inherited
"Winged helix" DNA-binding domain0.3912Inherited
TIMP-like0.3978Inherited
EGF/Laminin0.4347Inherited
Troponin coil-coiled subunits0.5157Inherited
p53-like transcription factors0.7087Inherited
Snake toxin-like0.7896Inherited
Frizzled cysteine-rich domain0.9772Inherited
Growth factor receptor domain0.9883Inherited
EF-hand0.9982Inherited
Cystine-knot cytokines1Inherited
Homeodomain-like1Inherited
Tropomyosin1Inherited
Immunoglobulin1Inherited
HLH, helix-loop-helix DNA-binding domain1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
50729,55550
  • 50729 - PH domain-like
  • 55550 - SH2 domain
  • 0Direct
    51230,47005
  • 51230 - Single hybrid motif
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 0Direct
    57630,57196
  • 57630 - GLA-domain
  • 57196 - EGF/Laminin
  • 0Direct
    52540,47917
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct
    56059,52210
  • 56059 - Glutathione synthetase ATP-binding domain-like
  • 52210 - Succinyl-CoA synthetase domains
  • 0Direct
    57924,57924
  • 57924 - Inhibitor of apoptosis (IAP) repeat
  • 57924 - Inhibitor of apoptosis (IAP) repeat
  • 0Direct
    52518,52922
  • 52518 - Thiamin diphosphate-binding fold (THDP-binding)
  • 52922 - TK C-terminal domain-like
  • 0Direct
    57196,50494
  • 57196 - EGF/Laminin
  • 50494 - Trypsin-like serine proteases
  • 0Direct
    81271,55186
  • 81271 - TGS-like
  • 55186 - ThrRS/AlaRS common domain
  • 0Direct
    54403,54403
  • 54403 - Cystatin/monellin
  • 54403 - Cystatin/monellin
  • 0Direct
    56968,48431
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 0Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0Direct
    54534,47473
  • 54534 - FKBP-like
  • 47473 - EF-hand
  • 0Direct
    54534,54534
  • 54534 - FKBP-like
  • 54534 - FKBP-like
  • 0Direct
    54236,50729
  • 54236 - Ubiquitin-like
  • 50729 - PH domain-like
  • 0Direct
    103025,101790
  • 103025 - Folate-binding domain
  • 101790 - Aminomethyltransferase beta-barrel domain
  • 0Direct
    53901,53901
  • 53901 - Thiolase-like
  • 53901 - Thiolase-like
  • 0Direct
    48371,46785
  • 48371 - ARM repeat
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    81995,81811
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
  • 0Direct
    47005,52777
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 52777 - CoA-dependent acyltransferases
  • 0Direct
    82895,57424
  • 82895 - TSP-1 type 1 repeat
  • 57424 - LDL receptor-like module
  • 0Direct
    57184,49899
  • 57184 - Growth factor receptor domain
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0Direct
    57424,57184
  • 57424 - LDL receptor-like module
  • 57184 - Growth factor receptor domain
  • 0Direct
    49899,52540
  • 49899 - Concanavalin A-like lectins/glucanases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    48034,55931
  • 48034 - Guanido kinase N-terminal domain
  • 55931 - Glutamine synthetase/guanido kinase
  • 0Direct
    54160,57850
  • 54160 - Chromo domain-like
  • 57850 - RING/U-box
  • 0Direct
    55550,50729
  • 55550 - SH2 domain
  • 50729 - PH domain-like
  • 0Direct
    55486,48371
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 48371 - ARM repeat
  • 0Direct
    53300,81995
  • 53300 - vWA-like
  • 81995 - beta-sandwich domain of Sec23/24
  • 0Direct
    53850,53850
  • 53850 - Periplasmic binding protein-like II
  • 53850 - Periplasmic binding protein-like II
  • 0Direct
    47095,47095
  • 47095 - HMG-box
  • 47095 - HMG-box
  • 0Direct
    57603,57440
  • 57603 - FnI-like domain
  • 57440 - Kringle-like
  • 0Direct
    51419,50621
  • 51419 - PLP-binding barrel
  • 50621 - Alanine racemase C-terminal domain-like
  • 0Direct
    54928,54928
  • 54928 - RNA-binding domain, RBD
  • 54928 - RNA-binding domain, RBD
  • 0.0002636Direct
    63737,55486
  • 63737 - Leukotriene A4 hydrolase N-terminal domain
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 0.06204Inherited
    47459,158457
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 158457 - Orange domain-like
  • 0.08867Inherited
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.1157Inherited
    54791,54791
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 0.1454Inherited
    103657,50729
  • 103657 - BAR/IMD domain-like
  • 50729 - PH domain-like
  • 0.1965Inherited
    52518,52518
  • 52518 - Thiamin diphosphate-binding fold (THDP-binding)
  • 52518 - Thiamin diphosphate-binding fold (THDP-binding)
  • 0.2437Inherited
    50494,50494
  • 50494 - Trypsin-like serine proteases
  • 50494 - Trypsin-like serine proteases
  • 0.2437Inherited
    57196,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.3348Inherited
    57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.3859Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.4433Inherited
    57184,57184
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 0.8415Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    63737,55486,48371
  • 63737 - Leukotriene A4 hydrolase N-terminal domain
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 48371 - ARM repeat
  • 0Direct
    57630,57196,57196
  • 57630 - GLA-domain
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0Direct
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0Direct
    52833,52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 0Direct
    56436,56436,56436
  • 56436 - C-type lectin-like
  • 56436 - C-type lectin-like
  • 56436 - C-type lectin-like
  • 0Direct
    53300,81995,81811
  • 53300 - vWA-like
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
  • 0Direct
    54791,54791,54791
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 0Direct
    51230,47005,52777
  • 51230 - Single hybrid motif
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 52777 - CoA-dependent acyltransferases
  • 0Direct
    50249,50249,50249
  • 50249 - Nucleic acid-binding proteins
  • 50249 - Nucleic acid-binding proteins
  • 50249 - Nucleic acid-binding proteins
  • 0Direct
    57424,57184,63825
  • 57424 - LDL receptor-like module
  • 57184 - Growth factor receptor domain
  • 63825 - YWTD domain
  • 0Direct
    81995,81811,82754
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
  • 0Direct
    54160,57850,57845
  • 54160 - Chromo domain-like
  • 57850 - RING/U-box
  • 57845 - B-box zinc-binding domain
  • 0Direct
    57196,49854,57535
  • 57196 - EGF/Laminin
  • 49854 - Spermadhesin, CUB domain
  • 57535 - Complement control module/SCR domain
  • 0Direct
    50729,55550,56112
  • 50729 - PH domain-like
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0Direct
    55550,56112,56112
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 56112 - Protein kinase-like (PK-like)
  • 0Direct
    57424,57424,57184
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 57184 - Growth factor receptor domain
  • 0Direct
    52058,52058,52058
  • 52058 - L domain-like
  • 52058 - L domain-like
  • 52058 - L domain-like
  • 0Direct
    57716,57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.2282Inherited
    57196,57184,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 0.2437Inherited
    57196,57196,57184
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.539Inherited
    57184,57196,57196
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.9648Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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