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Xenopus ANatomical entity (XAN): nerve

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   anatomical group [XAO:0003001] <2>(414|530) (418|309|134)
+ + + 3:   anatomical structure [XAO:0003000] <11>(577|733) (577|400|163)
+ + + 3:   whole organism [XAO:0003004] <12>(461|598) (465|335|145)
+ + 2:   anatomical system [XAO:0003002] <19>(283|382) (289|204|93)
+ + 2:   multicellular anatomical structure [XAO:0005002] <4>(436|565) (440|325|142)
+ 1:   nervous system [XAO:0000177] <11>(134|201) (141|114|53)
+ 1:   tissue [XAO:0003040] <186>(182|250) (189|130|58)
0:   nerve [XAO:0003047] <7>(7|8) (9|2|0)
- 1:   cephalic nerve [XAO:0005309] <5>(7|8) (9|2|0)
- 1:   Schwann cell [XAO:0005044](0|0) (0|0|0)
- 1:   ampullary nerve [XAO:0004058](0|0) (0|0|0)
- 1:   peripheral nerve [XAO:0000204](0|0) (0|0|0)
- 1:   sciatic nerve [XAO:0005065](0|0) (0|0|0)
- 1:   spinal nerve [XAO:0003101](0|0) (0|0|0)
- 1:   sympathetic chain [XAO:0000211](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Synuclein0Direct
Intermediate filament protein, coiled coil region0.00000003683Direct
Homeodomain-like0.0000003747Direct
Voltage-gated potassium channels0.0001379Direct
Tubulin C-terminal domain-like0.005081Inherited
Tubulin nucleotide-binding domain-like0.005081Inherited
p53-like transcription factors0.04254Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Synuclein0Direct
Intermediate filament protein, coiled coil region0.00000006139Direct
Homeodomain0.0000001608Direct
Tubulin, GTPase domain0.005259Inherited
Tubulin, C-terminal domain0.005259Inherited
Second domain of FERM0.006032Inherited
Tetramerization domain of potassium channels0.01028Inherited
Voltage-gated potassium channels0.01409Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Synuclein0Direct
Intermediate filament protein, coiled coil region0.00000002588Direct
Homeodomain-like0.000000265Direct
Voltage-gated potassium channels0.000102Direct
Second domain of FERM0.0007613Direct
Tubulin C-terminal domain-like0.003938Inherited
Tubulin nucleotide-binding domain-like0.003938Inherited
p53-like transcription factors0.03475Inherited
Galactose-binding domain-like0.04154Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.0004026Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.003938Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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