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Xenopus ANatomical entity (XAN): limb bud

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + + 4:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + + + 4:   whole organism [XAO:0003004] <12>(450|576) (454|327|143)
+ + + 3:   multicellular anatomical structure [XAO:0005002] <4>(437|563) (439|323|141)
+ + 2:   organism subdivision [XAO:0003013] <11>(378|498) (383|292|125)
+ 1:   surface structure [XAO:0003028] <14>(22|27) (25|11|5)
0:   limb bud [XAO:0003161] <8>(3|5) (5|0|0)
- 1:   forelimb bud [XAO:0003065] <1>(0|0) (1|0|0)
- 1:   hindlimb bud [XAO:0003066] <1>(1|2) (2|0|0)
- 1:   anterior-proximal mesenchyme [XAO:0004408](0|0) (0|0|0)
- 1:   apical ectodermal ridge [XAO:0004121](0|0) (0|0|0)
- 1:   distal mesenchyme [XAO:0004056](0|1) (1|0|0)
- 1:   interdigital mesenchyme [XAO:0004410](0|0) (0|0|0)
- 1:   posterior-proximal mesenchyme [XAO:0004409](0|0) (0|0|0)
- 1:   proximal mesenchyme [XAO:0004407](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain-like0.00000001238Direct
p53-like transcription factors0.00002093Direct
HLH, helix-loop-helix DNA-binding domain0.0001863Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain0.000000007519Direct
T-box0.0000248Direct
HLH, helix-loop-helix DNA-binding domain0.0002688Direct
Transforming growth factor (TGF)-beta0.0006918Direct
Fibroblast growth factors (FGF)0.001868Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Homeodomain-like0.000000008614Direct
p53-like transcription factors0.00001512Direct
HLH, helix-loop-helix DNA-binding domain0.0001377Direct
Cytokine0.001309Inherited
Cystine-knot cytokines0.002778Inherited


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
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