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Xenopus ANatomical entity (XAN): solid compound organ

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   whole organism [XAO:0003004] <12>(450|576) (454|327|143)
+ + + 3:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + 2:   multicellular anatomical structure [XAO:0005002] <4>(437|563) (439|323|141)
+ 1:   compound organ [XAO:0003041] <8>(334|444) (336|276|123)
0:   solid compound organ [XAO:0003164] <3>(22|34) (25|20|9)
- 1:   skeletal element [XAO:0004012] <8>(11|9) (12|4|2)
- 1:   liver [XAO:0000133] <3>(6|12) (7|11|4)
- 1:   adrenal gland [XAO:0000164] <2>(0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Fibrinogen coiled-coil and central regions0Direct
Mib/herc2 domain-like0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
DnaJ/Hsp40 cysteine-rich domain0Direct
Subunits of heterodimeric actin filament capping protein Capz0Direct
Moesin tail domain0Direct
Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain0Direct
Surp module (SWAP domain)0Direct
Succinyl-CoA synthetase domains0Direct
TK C-terminal domain-like0Direct
FAS1 domain0Direct
Apolipoprotein A-I0Direct
F1F0 ATP synthase subunit C0Direct
Thioredoxin-like0.001312Inherited
Annexin0.00171Inherited
Zn-binding ribosomal proteins0.01079Inherited
Actin depolymerizing proteins0.01872Inherited
LDH C-terminal domain-like0.02632Inherited
Translation proteins SH3-like domain0.03215Inherited
Spectrin repeat0.08192Inherited
p53-like transcription factors0.8097Inherited
Homeodomain-like1Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Succinyl-CoA synthetase domains0Direct
Ribosomal protein L30Direct
RUNT domain0Direct
Mib/herc2 domain0Direct
NIPSNAP0Direct
FAS1 domain0Direct
Apolipoprotein A-I0Direct
Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain0Direct
Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain0Direct
Variant RING domain0Direct
Moesin tail domain0Direct
DnaJ/Hsp40 cysteine-rich domain0Direct
CAT-like0Direct
HCDH C-domain-like0Direct
F1F0 ATP synthase subunit C0Direct
Ferritin0Direct
Phosphoribosylpyrophosphate synthetase-like0Direct
DJ-1/PfpI0Direct
Branched-chain alpha-keto acid dehydrogenase PP module0Direct
Fibronectin type I module0Direct
Netrin-like domain (NTR/C345C module)0Direct
Surp module (SWAP domain)0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
Fibrinogen coiled-coil and central regions0Direct
Serine carboxypeptidase-like0Direct
Proteasome subunits0.00007511Direct
Canonical RBD0.0002566Direct
Complement components0.004298Inherited
Glutathione peroxidase-like0.01614Inherited
Lactate & malate dehydrogenases, C-terminal domain0.02529Inherited
Linker histone H1/H50.02529Inherited
LDH N-terminal domain-like0.02529Inherited
Spectrin repeat0.0628Inherited
Homeodomain1Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain0Direct
Succinyl-CoA synthetase domains0Direct
Subunits of heterodimeric actin filament capping protein Capz0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
F1F0 ATP synthase subunit C0Direct
FAS1 domain0Direct
TK C-terminal domain-like0Direct
Surp module (SWAP domain)0Direct
Mib/herc2 domain-like0Direct
Fibrinogen coiled-coil and central regions0Direct
Apolipoprotein A-I0Direct
DnaJ/Hsp40 cysteine-rich domain0Direct
Moesin tail domain0Direct
RNA-binding domain, RBD0.0009467Direct
Thioredoxin-like0.0009946Direct
Annexin0.001301Inherited
UBC-like0.006507Inherited
Alpha-macroglobulin receptor domain0.008431Inherited
Zn-binding ribosomal proteins0.008431Inherited
Actin depolymerizing proteins0.0148Inherited
LDH C-terminal domain-like0.02101Inherited
Translation proteins SH3-like domain0.02584Inherited
Spectrin repeat0.06842Inherited
p53-like transcription factors0.7772Inherited
Homeodomain-like1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
46565,57938
  • 46565 - Chaperone J-domain
  • 57938 - DnaJ/Hsp40 cysteine-rich domain
  • 0Direct
    48371,46785
  • 48371 - ARM repeat
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    53300,81995
  • 53300 - vWA-like
  • 81995 - beta-sandwich domain of Sec23/24
  • 0Direct
    81995,81811
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
  • 0Direct
    57603,57440
  • 57603 - FnI-like domain
  • 57440 - Kringle-like
  • 0Direct
    51230,47005
  • 51230 - Single hybrid motif
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 0Direct
    54631,54631
  • 54631 - CBS-domain pair
  • 54631 - CBS-domain pair
  • 0Direct
    54403,54403
  • 54403 - Cystatin/monellin
  • 54403 - Cystatin/monellin
  • 0Direct
    82153,82153
  • 82153 - FAS1 domain
  • 82153 - FAS1 domain
  • 0Direct
    52518,52922
  • 52518 - Thiamin diphosphate-binding fold (THDP-binding)
  • 52922 - TK C-terminal domain-like
  • 0Direct
    82895,57424
  • 82895 - TSP-1 type 1 repeat
  • 57424 - LDL receptor-like module
  • 0Direct
    56059,52210
  • 56059 - Glutathione synthetase ATP-binding domain-like
  • 52210 - Succinyl-CoA synthetase domains
  • 0Direct
    57196,50494
  • 57196 - EGF/Laminin
  • 50494 - Trypsin-like serine proteases
  • 0Direct
    57938,49493
  • 57938 - DnaJ/Hsp40 cysteine-rich domain
  • 49493 - HSP40/DnaJ peptide-binding domain
  • 0Direct
    47005,52777
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 52777 - CoA-dependent acyltransferases
  • 0Direct
    54928,54928
  • 54928 - RNA-binding domain, RBD
  • 54928 - RNA-binding domain, RBD
  • 0.0002699Direct
    46966,47473
  • 46966 - Spectrin repeat
  • 47473 - EF-hand
  • 0.01337Inherited
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.0148Inherited
    51735,56327
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 56327 - LDH C-terminal domain-like
  • 0.02101Inherited
    47095,47095
  • 47095 - HMG-box
  • 47095 - HMG-box
  • 0.02101Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    56436,56436,56436
  • 56436 - C-type lectin-like
  • 56436 - C-type lectin-like
  • 56436 - C-type lectin-like
  • 0Direct
    57196,49854,57535
  • 57196 - EGF/Laminin
  • 49854 - Spermadhesin, CUB domain
  • 57535 - Complement control module/SCR domain
  • 0Direct
    46565,57938,49493
  • 46565 - Chaperone J-domain
  • 57938 - DnaJ/Hsp40 cysteine-rich domain
  • 49493 - HSP40/DnaJ peptide-binding domain
  • 0Direct
    51230,47005,52777
  • 51230 - Single hybrid motif
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 52777 - CoA-dependent acyltransferases
  • 0Direct
    81995,81811,82754
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
  • 0Direct
    53300,81995,81811
  • 53300 - vWA-like
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
  • 0Direct
    57938,49493,49493
  • 57938 - DnaJ/Hsp40 cysteine-rich domain
  • 49493 - HSP40/DnaJ peptide-binding domain
  • 49493 - HSP40/DnaJ peptide-binding domain
  • 0Direct
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.005499Inherited
    46966,46966,47473
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 47473 - EF-hand
  • 0.01337Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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