SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Xenopus ANatomical entity (XAN): splanchnocranium

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + + 4:   multicellular anatomical structure [XAO:0005002] <4>(437|563) (439|321|141)
+ + + + 4:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + + + 4:   anatomical region [XAO:0003186] <51>(373|484) (374|284|122)
+ + + + 4:   whole organism [XAO:0003004] <12>(463|595) (466|331|144)
+ + + 3:   organism subdivision [XAO:0003013] <11>(378|498) (381|291|125)
+ + + 3:   musculoskeletal system [XAO:0000168] <2>(43|60) (46|26|15)
+ + + 3:   head region [XAO:0000040] <4>(179|247) (182|139|57)
+ + + 3:   anatomical group [XAO:0003001] <2>(418|530) (420|307|132)
+ + + 3:   anatomical system [XAO:0003002] <19>(285|379) (290|203|91)
+ + 2:   skeletal system [XAO:0003060] <3>(16|18) (17|7|4)
+ + 2:   head [XAO:0003024] <22>(179|246) (182|139|57)
+ + 2:   anatomical cluster [XAO:0003160] <43>(93|140) (96|75|38)
+ 1:   cranium [XAO:0003075] <14>(5|9) (5|3|1)
0:   splanchnocranium [XAO:0003176] <5>(3|6) (3|0|0)
- 1:   branchial arch skeleton [XAO:0003180] <4>(1|1) (1|0|0)
- 1:   hyoid arch skeleton [XAO:0003177] <2>(0|0) (0|0|0)
- 1:   mandibular arch [XAO:0000097] <2>(1|2) (1|0|0)
- 1:   mandibular arch skeleton [XAO:0005162](0|0) (0|0|0)
- 1:   suspensorium [XAO:0003086](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Cytokine0.00005856Direct
HMG-box0.0007491Direct
p53-like transcription factors0.3851Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
RUNT domain0Direct
Glutathione peroxidase-like0.00001304Direct
Fibroblast growth factors (FGF)0.00003879Direct
Extracellular domain of cell surface receptors0.0001498Direct
HMG-box0.0008659Direct
Homeodomain0.8841Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Cytokine0.00004308Direct
HMG-box0.0005674Direct
p53-like transcription factors0.3541Inherited


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)