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Xenopus ANatomical entity (XAN): anatomical direction

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ 1:   Xenopus anatomical entity [XAO:0000000] <9>
0:   anatomical direction [XAO:0003185] <16>(12|16) (12|6|2)
- 1:   animal [XAO:0000297](1|0) (1|1|0)
- 1:   anterior [XAO:0003056](0|0) (0|0|0)
- 1:   deep [XAO:0000301](0|1) (0|0|0)
- 1:   distal [XAO:0003189](0|0) (0|0|0)
- 1:   dorsal [XAO:0000298](0|0) (0|1|0)
- 1:   dorso-lateral [XAO:0000302](1|1) (1|0|0)
- 1:   lateral [XAO:0000304](2|2) (2|0|0)
- 1:   left [XAO:0005005](0|0) (0|0|0)
- 1:   medial [XAO:0003187](0|0) (0|0|0)
- 1:   posterior [XAO:0003057](0|0) (0|0|0)
- 1:   proximal [XAO:0003188](0|0) (0|0|0)
- 1:   right [XAO:0005006](0|0) (0|0|0)
- 1:   superficial [XAO:0000300](0|0) (0|0|0)
- 1:   vegetal [XAO:0000296](0|0) (0|0|0)
- 1:   ventral [XAO:0000299](0|0) (0|0|0)
- 1:   ventro-lateral [XAO:0000303](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain-like0Direct
HLH, helix-loop-helix DNA-binding domain0Direct
Cystine-knot cytokines0.000000003209Direct
Frizzled cysteine-rich domain0.00000003021Direct
"Winged helix" DNA-binding domain0.0000000747Direct
HMG-box0.000002635Direct
Orange domain-like0.000004115Direct
p53-like transcription factors0.00001873Direct
Glucocorticoid receptor-like (DNA-binding domain)0.00003523Direct
Cytokine0.00003891Direct
SMAD MH1 domain0.0003427Direct
RNI-like0.2688Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain0Direct
HLH, helix-loop-helix DNA-binding domain0Direct
Forkhead DNA-binding domain0.0000000000005018Direct
Transforming growth factor (TGF)-beta0.00000000002519Direct
Frizzled cysteine-rich domain0.00000005611Direct
Erythroid transcription factor GATA-10.0000001771Direct
Hairy Orange domain0.000005295Direct
HMG-box0.00000551Direct
ets domain0.00001617Direct
T-box0.00002704Direct
Fibroblast growth factors (FGF)0.00002704Direct
Paired domain0.00004608Direct
Cell cycle control phosphatase, catalytic domain0.000121Direct
SMAD MH1 domain0.0003824Direct
LIM domain0.0005994Direct
SMAD domain0.0009194Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
HLH, helix-loop-helix DNA-binding domain0Direct
Homeodomain-like0Direct
Cystine-knot cytokines0.000000002244Direct
Frizzled cysteine-rich domain0.00000002122Direct
"Winged helix" DNA-binding domain0.00000005258Direct
HMG-box0.000001885Direct
Orange domain-like0.00000295Direct
p53-like transcription factors0.00001357Direct
Glucocorticoid receptor-like (DNA-binding domain)0.0000257Direct
Cytokine0.00002841Direct
SMAD MH1 domain0.0002565Direct
RNI-like0.2415Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.00000008293Direct
    47459,158457
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 158457 - Orange domain-like
  • 0.00000295Direct
    57603,57603
  • 57603 - FnI-like domain
  • 57603 - FnI-like domain
  • 0.00002825Direct
    57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.0007092Direct
    63501,50242
  • 63501 - Frizzled cysteine-rich domain
  • 50242 - TIMP-like
  • 0.0007947Direct
    81383,52047
  • 81383 - F-box domain
  • 52047 - RNI-like
  • 0.01225Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57603,57603,57603
  • 57603 - FnI-like domain
  • 57603 - FnI-like domain
  • 57603 - FnI-like domain
  • 0.0000804Direct
    57196,57196,57184
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.0001782Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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