SUPERFAMILY 1.75 HMM library and genome assignments server

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Xenopus ANatomical entity (XAN): early embryonic cell

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + 2:   Xenopus anatomical entity [XAO:0000000] <9>
+ + 2:   anatomical structure [XAO:0003000] <11>(577|733) (577|400|163)
+ + 2:   whole organism [XAO:0003004] <12>(461|598) (465|335|145)
+ 1:   embryo [XAO:0000113] <8>(134|185) (134|89|38)
+ 1:   cell [XAO:0003012] <71>(92|101) (93|35|16)
0:   early embryonic cell [XAO:0003241] <3>(3|4) (3|1|0)
- 1:   blastomere [XAO:0003016] <12>(2|2) (2|1|0)
- 1:   gastrula cell [XAO:0003244] <1>(1|1) (1|0|0)
- 1:   morula cell [XAO:0003242](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Cystine-knot cytokines0.000005361Direct
14-3-3 protein0.00001769Direct
"Winged helix" DNA-binding domain0.000208Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Transforming growth factor (TGF)-beta0.000005359Direct
14-3-3 protein0.00001578Direct
Phosphotyrosine-binding domain (PTB)0.0005309Direct
Forkhead DNA-binding domain0.0006274Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Cystine-knot cytokines0.000003845Direct
14-3-3 protein0.0000128Direct
"Winged helix" DNA-binding domain0.0001547Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
50156,50156
  • 50156 - PDZ domain-like
  • 50156 - PDZ domain-like
  • 0.001314Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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