SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Xenopus ANatomical entity (XAN): muscular system

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   whole organism [XAO:0003004] <12>(461|598) (465|335|145)
+ + + 3:   anatomical structure [XAO:0003000] <11>(577|733) (577|400|163)
+ + 2:   anatomical group [XAO:0003001] <2>(414|530) (418|309|134)
+ 1:   musculoskeletal system [XAO:0000168] <2>(44|60) (47|28|16)
+ 1:   anatomical system [XAO:0003002] <19>(283|382) (289|204|93)
0:   muscular system [XAO:0004042] <4>(28|40) (31|19|9)
- 1:   cranial muscle primordium [XAO:0004455] <30>(1|1) (1|0|0)
- 1:   muscle [XAO:0000172] <10>(20|26) (23|11|4)
- 1:   somite [XAO:0000058] <5>(8|11) (10|6|3)
- 1:   presomitic mesoderm [XAO:0000057] <2>(5|9) (5|3|2)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Mitochondrial cytochrome c oxidase subunit VIIa0Direct
HSP90 C-terminal domain0Direct
SRF-like0Direct
HLH, helix-loop-helix DNA-binding domain0.0000002017Direct
RNA-binding domain, RBD0.000007509Direct
GroEL equatorial domain-like0.00002087Direct
GroEL-intermediate domain like0.00003517Direct
Orange domain-like0.00003517Direct
Translation proteins SH3-like domain0.00004313Direct
GroEL apical domain-like0.0001542Direct
Acyl-CoA dehydrogenase C-terminal domain-like0.0002012Direct
Acyl-CoA dehydrogenase NM domain-like0.0002012Direct
HSP20-like chaperones0.001598Inherited
Zn-binding ribosomal proteins0.001715Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.003331Inherited
Actin-like ATPase domain0.005166Inherited
Cytokine0.005682Inherited
Frizzled cysteine-rich domain0.006887Inherited
Heat shock protein 70kD (HSP70), peptide-binding domain0.007792Inherited
Thiolase-like0.008478Inherited
14-3-3 protein0.02401Inherited
Tropomyosin0.05031Inherited
PYP-like sensor domain (PAS domain)0.05126Inherited
Myosin rod fragments0.06186Inherited
EF-hand0.2105Inherited
Homeodomain-like0.2213Inherited
p53-like transcription factors0.2402Inherited
FnI-like domain0.2731Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Group II chaperonin (CCT, TRIC), intermediate domain0Direct
SRF-like0Direct
GABARAP-like0Direct
Branched-chain alpha-keto acid dehydrogenase PP module0Direct
HSP90 C-terminal domain0Direct
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain0Direct
Heat shock protein 90, HSP90, N-terminal domain0Direct
A20-like zinc finger0Direct
Hsp90 middle domain0Direct
Mitochondrial cytochrome c oxidase subunit VIIa0Direct
Malic enzyme N-domain0Direct
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain0Direct
GDI-like N domain0Direct
Canonical RBD0.0000004608Direct
HLH, helix-loop-helix DNA-binding domain0.0000006125Direct
Proteasome subunits0.000001812Direct
Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains0.000002952Direct
Medium chain acyl-CoA dehydrogenase-like, C-terminal domain0.000002952Direct
Hairy Orange domain0.00003817Direct
Actin/HSP700.00004581Direct
Group II chaperonin (CCT, TRIC), apical domain0.0001363Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.0003236Direct
Parvalbumin0.001694Inherited
Glutathione peroxidase-like0.002002Inherited
Thiolase-related0.002739Inherited
Translational machinery components0.002739Inherited
Frizzled cysteine-rich domain0.007917Inherited
Heat shock protein 70kD (HSP70), peptide-binding domain0.008141Inherited
Fibroblast growth factors (FGF)0.01444Inherited
Hypoxia-inducible factor Hif2a, C-terminal domain0.01722Inherited
Tropomyosin0.01991Inherited
14-3-3 protein0.02315Inherited
L domain0.02315Inherited
T-box0.03786Inherited
Myosin rod fragments0.04485Inherited
28-residue LRR0.07698Inherited
Forkhead DNA-binding domain0.1565Inherited
Erythroid transcription factor GATA-10.1754Inherited
Homeodomain0.3571Inherited
Motor proteins0.5761Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Mitochondrial cytochrome c oxidase subunit VIIa0Direct
HSP90 C-terminal domain0Direct
SRF-like0Direct
HLH, helix-loop-helix DNA-binding domain0.0000001423Direct
RNA-binding domain, RBD0.000005399Direct
GroEL equatorial domain-like0.00001514Direct
Orange domain-like0.00002565Direct
GroEL-intermediate domain like0.00002565Direct
Translation proteins SH3-like domain0.00003151Direct
GroEL apical domain-like0.0001142Direct
Acyl-CoA dehydrogenase NM domain-like0.0001496Direct
Acyl-CoA dehydrogenase C-terminal domain-like0.0001496Direct
HSP20-like chaperones0.00122Inherited
Zn-binding ribosomal proteins0.001311Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.002563Inherited
Actin-like ATPase domain0.004006Inherited
Cytokine0.004414Inherited
LDH C-terminal domain-like0.004642Inherited
Pentein0.004642Inherited
Frizzled cysteine-rich domain0.005372Inherited
Heat shock protein 70kD (HSP70), peptide-binding domain0.006084Inherited
Thiolase-like0.006633Inherited
Translation proteins0.007104Inherited
14-3-3 protein0.01915Inherited
Tropomyosin0.04133Inherited
PYP-like sensor domain (PAS domain)0.04215Inherited
Myosin rod fragments0.05108Inherited
EF-hand0.1863Inherited
Homeodomain-like0.1966Inherited
p53-like transcription factors0.2145Inherited
FnI-like domain0.2455Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
90257,90257
  • 90257 - Myosin rod fragments
  • 90257 - Myosin rod fragments
  • 0Direct
    52540,53254
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 53254 - Phosphoglycerate mutase-like
  • 0Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0Direct
    48371,46785
  • 48371 - ARM repeat
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    54631,54631
  • 54631 - CBS-domain pair
  • 54631 - CBS-domain pair
  • 0Direct
    47459,158457
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 158457 - Orange domain-like
  • 0.00002565Direct
    54928,54928
  • 54928 - RNA-binding domain, RBD
  • 54928 - RNA-binding domain, RBD
  • 0.00004083Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.00009619Direct
    56645,47203
  • 56645 - Acyl-CoA dehydrogenase NM domain-like
  • 47203 - Acyl-CoA dehydrogenase C-terminal domain-like
  • 0.0001496Direct
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.001502Inherited
    51735,56327
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 56327 - LDH C-terminal domain-like
  • 0.004642Inherited
    53067,100920
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.006084Inherited
    100920,100934
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.006443Inherited
    53901,53901
  • 53901 - Thiolase-like
  • 53901 - Thiolase-like
  • 0.006633Inherited
    52058,57184
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0.01915Inherited
    57184,52058
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 0.01915Inherited
    47459,55785
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0.04114Inherited
    55785,55785
  • 55785 - PYP-like sensor domain (PAS domain)
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0.06803Inherited
    57184,57184
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 0.1187Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    90257,90257,90257
  • 90257 - Myosin rod fragments
  • 90257 - Myosin rod fragments
  • 90257 - Myosin rod fragments
  • 0Direct
    57184,52058,57184
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0Direct
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0Direct
    57196,57184,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 0.004642Inherited
    53067,53067,100920
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.006084Inherited
    53067,100920,100934
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.006443Inherited
    47459,55785,55785
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 55785 - PYP-like sensor domain (PAS domain)
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0.03845Inherited
    48371,48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.07077Inherited
    57196,57196,57184
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.2003Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)