SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Xenopus ANatomical entity (XAN): migratory neural crest cell

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   embryo [XAO:0000113] <8>(133|186) (135|86|36)
+ + + + 4:   primary germ layer [XAO:0003011] <4>(107|153) (108|70|28)
+ + + 3:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   ectoderm [XAO:0000001] <15>(61|84) (61|42|10)
+ + + 3:   multicellular anatomical structure [XAO:0005002] <4>(437|563) (439|323|141)
+ + 2:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + 2:   whole organism [XAO:0003004] <12>(450|576) (454|327|143)
+ + 2:   tissue [XAO:0003040] <184>(180|248) (186|128|57)
+ + 2:   neuroectoderm [XAO:0000042] <9>(25|29) (26|14|4)
+ 1:   neural crest [XAO:0000048] <8>(10|14) (11|5|2)
+ 1:   cell [XAO:0003012] <70>(92|101) (93|35|16)
0:   migratory neural crest cell [XAO:0004069] <1>(0|1) (0|1|0)
- 1:   migratory trunk neural crest cell [XAO:0005246](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Cyclin0.000766Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.0003189Direct