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Xenopus ANatomical entity (XAN): optic field

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   embryo [XAO:0000113] <8>(134|185) (134|89|38)
+ + + + + 5:   primary germ layer [XAO:0003011] <4>(109|155) (109|73|30)
+ + + + 4:   ectoderm [XAO:0000001] <15>(62|85) (62|43|11)
+ + + 3:   anatomical structure [XAO:0003000] <11>(577|733) (577|400|163)
+ + + 3:   multicellular anatomical structure [XAO:0005002] <4>(436|565) (440|325|142)
+ + + 3:   neuroectoderm [XAO:0000042] <9>(27|31) (27|15|5)
+ + 2:   neural plate [XAO:0000249] <10>(19|17) (19|7|3)
+ + 2:   Xenopus anatomical entity [XAO:0000000] <9>
+ + 2:   whole organism [XAO:0003004] <12>(461|598) (465|335|145)
+ + 2:   tissue [XAO:0003040] <186>(182|250) (189|130|58)
+ 1:   pre-chordal neural plate [XAO:0000045] <3>(10|11) (10|3|2)
+ 1:   anatomical region [XAO:0003186] <51>(370|484) (374|284|123)
0:   optic field [XAO:0004090](6|5) (6|1|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain-like0.000000005023Direct
Frizzled cysteine-rich domain0.000001489Direct
HMG-box0.000009116Direct
"Winged helix" DNA-binding domain0.0000658Direct
HLH, helix-loop-helix DNA-binding domain0.0001028Direct
TIMP-like0.0002583Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain0.000001267Direct
Frizzled cysteine-rich domain0.000001615Direct
Forkhead DNA-binding domain0.000006117Direct
HMG-box0.00001041Direct
HLH, helix-loop-helix DNA-binding domain0.0001227Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Homeodomain-like0.000000003516Direct
Frizzled cysteine-rich domain0.000001061Direct
HMG-box0.000006565Direct
"Winged helix" DNA-binding domain0.00004833Direct
HLH, helix-loop-helix DNA-binding domain0.00007593Direct
TIMP-like0.0001926Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
63501,50242
  • 63501 - Frizzled cysteine-rich domain
  • 50242 - TIMP-like
  • 0.0000008411Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)