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Xenopus ANatomical entity (XAN): optic field

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   embryo [XAO:0000113] <8>(133|186) (135|86|36)
+ + + + + 5:   primary germ layer [XAO:0003011] <4>(107|153) (108|70|28)
+ + + + 4:   ectoderm [XAO:0000001] <15>(61|84) (61|42|10)
+ + + 3:   multicellular anatomical structure [XAO:0005002] <4>(437|563) (439|323|141)
+ + + 3:   neuroectoderm [XAO:0000042] <9>(25|29) (26|14|4)
+ + + 3:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + 2:   tissue [XAO:0003040] <184>(180|248) (186|128|57)
+ + 2:   neural plate [XAO:0000249] <10>(18|18) (18|7|2)
+ + 2:   Xenopus anatomical entity [XAO:0000000] <9>
+ + 2:   whole organism [XAO:0003004] <12>(450|576) (454|327|143)
+ 1:   anatomical region [XAO:0003186] <43>(373|484) (375|285|122)
+ 1:   pre-chordal neural plate [XAO:0000045] <3>(10|11) (10|3|1)
0:   optic field [XAO:0004090](6|5) (6|1|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain-like0.000000005502Direct
Frizzled cysteine-rich domain0.000001557Direct
HMG-box0.00000952Direct
"Winged helix" DNA-binding domain0.00006943Direct
HLH, helix-loop-helix DNA-binding domain0.0001079Direct
TIMP-like0.0002658Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain0.00000136Direct
Frizzled cysteine-rich domain0.000001676Direct
Forkhead DNA-binding domain0.000006368Direct
HMG-box0.00001083Direct
HLH, helix-loop-helix DNA-binding domain0.0001283Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Homeodomain-like0.000000003824Direct
Frizzled cysteine-rich domain0.000001101Direct
HMG-box0.000006821Direct
"Winged helix" DNA-binding domain0.00005075Direct
HLH, helix-loop-helix DNA-binding domain0.00007922Direct
TIMP-like0.0001975Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
63501,50242
  • 63501 - Frizzled cysteine-rich domain
  • 50242 - TIMP-like
  • 0.000000865Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)