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Xenopus ANatomical entity (XAN): neural plate border

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + + 3:   whole organism [XAO:0003004] <12>(450|576) (454|327|143)
+ + + 3:   embryo [XAO:0000113] <8>(133|186) (135|86|36)
+ + 2:   primary germ layer [XAO:0003011] <4>(107|153) (108|70|28)
+ + 2:   multicellular anatomical structure [XAO:0005002] <4>(437|563) (439|323|141)
+ + 2:   neuroectoderm [XAO:0000042] <9>(25|29) (26|14|4)
+ 1:   neural plate [XAO:0000249] <10>(18|18) (18|7|2)
+ 1:   tissue [XAO:0003040] <184>(180|248) (186|128|57)
+ 1:   ectoderm [XAO:0000001] <15>(61|84) (61|42|10)
0:   neural plate border [XAO:0004104] <2>(5|6) (6|2|0)
- 1:   chordal neural plate border [XAO:0004103](3|3) (3|1|0)
- 1:   pre-chordal neural plate border [XAO:0004102](4|4) (4|1|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain-like0.000000000006127Direct
HLH, helix-loop-helix DNA-binding domain0.000000009667Direct
HMG-box0.00000001789Direct
beta-beta-alpha zinc fingers0.002913Inherited
Growth factor receptor domain0.02201Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain0.00000000005962Direct
HLH, helix-loop-helix DNA-binding domain0.00000003133Direct
HMG-box0.00000003989Direct
Classic zinc finger, C2H20.0003227Direct
Paired domain0.0006647Direct
Forkhead DNA-binding domain0.001649Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Homeodomain-like0.00000000000423Direct
HLH, helix-loop-helix DNA-binding domain0.000000006725Direct
HMG-box0.00000001246Direct
Orange domain-like0.0007756Direct
beta-beta-alpha zinc fingers0.002234Inherited
Growth factor receptor domain0.0175Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.00005836Direct
    47459,158457
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 158457 - Orange domain-like
  • 0.0007756Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)