SUPERFAMILY 1.75 HMM library and genome assignments server

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Xenopus ANatomical entity (XAN): vegetal pole

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + 2:   embryo [XAO:0000113] <8>(133|186) (135|86|36)
+ + 2:   Xenopus anatomical entity [XAO:0000000] <9>
+ + 2:   whole organism [XAO:0003004] <12>(450|576) (454|327|143)
+ 1:   vegetal hemisphere [XAO:0000280] <3>(4|5) (4|2|0)
+ 1:   anatomical region [XAO:0003186] <43>(373|484) (375|285|122)
0:   vegetal pole [XAO:0004113](1|1) (1|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
RNA-binding domain, RBD0.0005023Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Canonical RBD0.0001589Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
RNA-binding domain, RBD0.000376Direct


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
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