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Xenopus ANatomical entity (XAN): anterior placodal area

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   embryo [XAO:0000113] <8>(133|186) (135|86|36)
+ + + + + 5:   primary germ layer [XAO:0003011] <4>(107|154) (108|70|28)
+ + + + 4:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + + 4:   ectoderm [XAO:0000001] <15>(61|84) (61|41|10)
+ + + 3:   whole organism [XAO:0003004] <12>(450|576) (454|327|143)
+ + + 3:   neuroectoderm [XAO:0000042] <9>(25|29) (26|13|4)
+ + + 3:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + 2:   sensorial layer of neurectoderm [XAO:0000270] <1>(6|4) (7|1|1)
+ + 2:   multicellular anatomical structure [XAO:0005002] <4>(437|563) (439|323|141)
+ 1:   preplacodal ectoderm [XAO:0004092] <3>(6|4) (7|1|1)
+ 1:   tissue [XAO:0003040] <184>(180|249) (186|128|57)
0:   anterior placodal area [XAO:0004206] <1>(6|4) (6|1|1)
- 1:   lens placode [XAO:0000240](1|0) (1|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
PriA/YqbF domain0Direct
Homeodomain-like0.000000000007968Direct
HLH, helix-loop-helix DNA-binding domain0.00000007471Direct
GINS helical bundle-like0.0000187Direct
Glucocorticoid receptor-like (DNA-binding domain)0.00003508Direct
"Winged helix" DNA-binding domain0.0008805Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain0.00000000002179Direct
HLH, helix-loop-helix DNA-binding domain0.0000001367Direct
Forkhead DNA-binding domain0.000008638Direct
Paired domain0.0009705Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
PriA/YqbF domain0Direct
Homeodomain-like0.000000000005502Direct
HLH, helix-loop-helix DNA-binding domain0.00000005221Direct
GINS helical bundle-like0.00001348Direct
Glucocorticoid receptor-like (DNA-binding domain)0.00002547Direct
"Winged helix" DNA-binding domain0.0006631Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.00001407Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57196,57196,57184
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.0007607Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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