SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Xenopus ANatomical entity (XAN): skeletal subdivision

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   anatomical system [XAO:0003002] <19>(239|330) (246|188|86)
+ + + 3:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + + 3:   whole organism [XAO:0003004] <12>(450|576) (454|327|143)
+ + + 3:   musculoskeletal system [XAO:0000168] <2>(43|60) (45|26|15)
+ + 2:   skeletal system [XAO:0003060] <3>(16|17) (17|7|4)
+ + 2:   anatomical group [XAO:0003001] <2>(374|481) (379|294|130)
+ 1:   skeleton [XAO:0004053] <3>(12|9) (13|4|2)
+ 1:   anatomical cluster [XAO:0003160] <43>(93|139) (96|75|38)
0:   skeletal subdivision [XAO:0004289] <18>(3|2) (3|0|0)
- 1:   branchial arch skeleton [XAO:0003180] <6>(1|1) (1|0|0)
- 1:   appendicular skeleton [XAO:0003166] <5>(2|1) (2|0|0)
- 1:   forelimb skeleton [XAO:0003061] <5>(0|0) (0|0|0)
- 1:   hindlimb skeleton [XAO:0003062] <5>(2|1) (2|0|0)
- 1:   pelvic girdle [XAO:0003064] <4>(0|0) (0|0|0)
- 1:   postcranial axial skeleton [XAO:0003073] <3>(0|0) (0|0|0)
- 1:   axial skeleton [XAO:0004011] <2>(0|0) (0|0|0)
- 1:   cranial skeleton [XAO:0004279] <2>(0|0) (0|0|0)
- 1:   dermal skeleton [XAO:0004025] <2>(0|0) (0|0|0)
- 1:   endoskeleton [XAO:0004026] <2>(2|2) (2|0|0)
- 1:   hyoid arch skeleton [XAO:0003177] <2>(0|0) (0|0|0)
- 1:   median fin skeleton [XAO:0004282] <2>(0|0) (0|0|0)
- 1:   pectoral girdle [XAO:0003063] <2>(0|0) (0|0|0)
- 1:   vertebral column [XAO:0003074] <2>(0|0) (0|0|0)
- 1:   braincase and otic capsule skeleton [XAO:0003083] <1>(0|0) (0|0|0)
- 1:   left part of branchial arch skeleton [XAO:0005270](0|0) (0|0|0)
- 1:   mandibular arch skeleton [XAO:0005162](0|0) (0|0|0)
- 1:   right part of branchial arch skeleton [XAO:0005271](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain-like0.00000000277Direct
p53-like transcription factors0.000001161Direct
Cystine-knot cytokines0.00178Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
RUNT domain0Direct
Homeodomain0.00000000102Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Homeodomain-like0.000000001924Direct
p53-like transcription factors0.0000008203Direct
Cystine-knot cytokines0.001356Inherited


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)