SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Xenopus ANatomical entity (XAN): spinal neuron

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   anatomical group [XAO:0003001] <2>(374|481) (379|294|130)
+ + + + 4:   multicellular anatomical structure [XAO:0005002] <4>(437|563) (439|323|141)
+ + + + 4:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   compound organ [XAO:0003041] <8>(334|444) (336|276|123)
+ + + 3:   anatomical system [XAO:0003002] <19>(239|330) (246|188|86)
+ + + 3:   whole organism [XAO:0003004] <12>(450|576) (454|327|143)
+ + + 3:   anatomical structure [XAO:0003000] <11>(575|729) (575|396|161)
+ + 2:   cavitated compound organ [XAO:0003165] <23>(286|393) (290|248|112)
+ + 2:   cell [XAO:0003012] <70>(92|101) (93|35|16)
+ + 2:   nervous system [XAO:0000177] <11>(133|200) (140|113|51)
+ + 2:   central nervous system [XAO:0000215] <7>(128|190) (132|108|47)
+ 1:   spinal cord [XAO:0000020] <10>(18|26) (20|19|9)
+ 1:   neuron [XAO:0003023] <18>(10|12) (11|3|1)
0:   spinal neuron [XAO:0005018](3|3) (3|1|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Intermediate filament protein, coiled coil region0.00001967Direct
Tubulin nucleotide-binding domain-like0.0002174Direct
Tubulin C-terminal domain-like0.0002174Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Intermediate filament protein, coiled coil region0.00001559Direct
Tubulin, C-terminal domain0.0001723Direct
Tubulin, GTPase domain0.0001723Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Intermediate filament protein, coiled coil region0.00001419Direct
Tubulin C-terminal domain-like0.0001609Direct
Tubulin nucleotide-binding domain-like0.0001609Direct

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.0001609Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)