SUPERFAMILY 1.75 HMM library and genome assignments server

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Xenopus DEvelopment stage (XDE): NF stage 25

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   embryonic stage [XAO:1000012] <6>(40|57) (41|42|16)
+ + 2:   Xenopus developmental stage [XAO:1000000] <6>
+ + 2:   tailbud stage [XAO:1000007] <2>(18|16) (18|14|5)
+ 1:   NF stage [XAO:1000094] <68>(432|574) (432|325|138)
+ 1:   early tailbud stage [XAO:1000002] <7>(4|2) (4|0|0)
0:   NF stage 25 [XAO:1000041](3|1) (3|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
gamma-Crystallin-like0.00008656Direct
SRCR-like0.0002007Direct
cAMP-binding domain-like0.0003377Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Crystallins/Ca-binding development proteins0.00005941Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
gamma-Crystallin-like0.00005764Direct
SRCR-like0.0001345Direct
cAMP-binding domain-like0.0002272Direct


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
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