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Xenopus DEvelopment stage (XDE): unspecified stage

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ 1:   Xenopus developmental stage [XAO:1000000] <6>
0:   unspecified stage [XAO:1000081](35|46) (36|24|7)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
TK C-terminal domain-like0Direct
4Fe-4S ferredoxins0Direct
Subdomain of clathrin and coatomer appendage domain0Direct
PAH2 domain0Direct
Homocysteine S-methyltransferase0Direct
PK beta-barrel domain-like0Direct
Aconitase iron-sulfur domain0Direct
Nop domain0Direct
Cation efflux protein cytoplasmic domain-like0Direct
Ammonium transporter0Direct
PABC (PABP) domain0Direct
LeuD/IlvD-like0Direct
Apolipoprotein A-I0Direct
Subunits of heterodimeric actin filament capping protein Capz0Direct
Ribosomal protein L10-like0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Uracil-DNA glycosylase-like0Direct
Succinyl-CoA synthetase domains0Direct
SCP-like0Direct
Zn-finger domain of Sec23/240Direct
BSD domain-like0Direct
Guanido kinase N-terminal domain0Direct
Moesin tail domain0Direct
PLP-binding barrel0Direct
Alanine racemase C-terminal domain-like0Direct
DnaJ/Hsp40 cysteine-rich domain0Direct
SIS domain0Direct
Mitochondrial carrier0.000001417Direct
MFS general substrate transporter0.00005262Direct
RNA-binding domain, RBD0.0001914Direct
Annexin0.0003503Direct
Cation efflux protein transmembrane domain-like0.0003503Direct
GST C-terminal domain-like0.0005049Direct
GroEL-intermediate domain like0.0009089Direct
GroEL equatorial domain-like0.0009089Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Zn-finger domain of Sec23/240Direct
Sterol carrier protein, SCP0Direct
Ran-binding domain0Direct
Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain0Direct
Alanine racemase-like, N-terminal domain0Direct
Moesin tail domain0Direct
Protein prenyltransferases0Direct
Ferredoxin reductase FAD-binding domain-like0Direct
Guanido kinase catalytic domain0Direct
A20-like zinc finger0Direct
Ammonium transporter0Direct
a tRNA synthase domain0Direct
Malic enzyme N-domain0Direct
Nop domain0Direct
Transferrin0Direct
S-adenosylhomocystein hydrolase0Direct
Ferritin0Direct
Glycerol-3-phosphate transporter0Direct
BSD domain0Direct
Apolipoprotein A-I0Direct
Cation efflux protein transmembrane domain-like0Direct
Protein-L-isoaspartyl O-methyltransferase0Direct
Pumilio repeat0Direct
DNA ligase0Direct
Arginase-like amidino hydrolases0Direct
PUA domain0Direct
PABC (PABP) domain0Direct
Guanido kinase N-terminal domain0Direct
Alpha-adaptin ear subdomain-like0Direct
Clathrin adaptor appendage, alpha and beta chain-specific domain0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Succinyl-CoA synthetase domains0Direct
Eukaryotic ODC-like0Direct
DnaJ/Hsp40 cysteine-rich domain0Direct
Group II chaperonin (CCT, TRIC), intermediate domain0Direct
Homocysteine S-methyltransferase0Direct
Class II glutamine amidotransferases0Direct
Aconitase iron-sulfur domain0Direct
Branched-chain alpha-keto acid dehydrogenase PP module0Direct
LeuD-like0Direct
PAH2 domain0Direct
Mitochondrial carrier0.0000003864Direct
Canonical RBD0.00006514Direct
Glutathione S-transferase (GST), C-terminal domain0.0001305Direct
Annexin0.0002681Direct
Glutathione S-transferase (GST), N-terminal domain0.0003212Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
SCP-like0Direct
Moesin tail domain0Direct
Apolipoprotein A-I0Direct
Guanido kinase N-terminal domain0Direct
PABC (PABP) domain0Direct
Subunits of heterodimeric actin filament capping protein Capz0Direct
Cation efflux protein cytoplasmic domain-like0Direct
BSD domain-like0Direct
SIS domain0Direct
LeuD/IlvD-like0Direct
Uracil-DNA glycosylase-like0Direct
Subdomain of clathrin and coatomer appendage domain0Direct
Ammonium transporter0Direct
4Fe-4S ferredoxins0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Alanine racemase C-terminal domain-like0Direct
Succinyl-CoA synthetase domains0Direct
Zn-finger domain of Sec23/240Direct
Aconitase iron-sulfur domain0Direct
Nop domain0Direct
DnaJ/Hsp40 cysteine-rich domain0Direct
PLP-binding barrel0Direct
TK C-terminal domain-like0Direct
Ribosomal protein L10-like0Direct
Homocysteine S-methyltransferase0Direct
PAH2 domain0Direct
PK beta-barrel domain-like0Direct
Mitochondrial carrier0.0000009371Direct
MFS general substrate transporter0.00003498Direct
RNA-binding domain, RBD0.0001282Direct
Cation efflux protein transmembrane domain-like0.000236Direct
Annexin0.000236Direct
GST C-terminal domain-like0.0003416Direct
GroEL equatorial domain-like0.0006214Direct
GroEL-intermediate domain like0.0006214Direct
Actin depolymerizing proteins0.0008477Direct

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54534,54534
  • 54534 - FKBP-like
  • 54534 - FKBP-like
  • 0Direct
    47473,103506
  • 47473 - EF-hand
  • 103506 - Mitochondrial carrier
  • 0Direct
    53850,53850
  • 53850 - Periplasmic binding protein-like II
  • 53850 - Periplasmic binding protein-like II
  • 0Direct
    52087,101576
  • 52087 - CRAL/TRIO domain
  • 101576 - Supernatant protein factor (SPF), C-terminal domain
  • 0Direct
    53732,52016
  • 53732 - Aconitase iron-sulfur domain
  • 52016 - LeuD/IlvD-like
  • 0Direct
    56059,52210
  • 56059 - Glutathione synthetase ATP-binding domain-like
  • 52210 - Succinyl-CoA synthetase domains
  • 0Direct
    82754,55753
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
  • 55753 - Actin depolymerizing proteins
  • 0Direct
    52540,47917
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct
    55486,48371
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 48371 - ARM repeat
  • 0Direct
    57924,57924
  • 57924 - Inhibitor of apoptosis (IAP) repeat
  • 57924 - Inhibitor of apoptosis (IAP) repeat
  • 0Direct
    51419,50621
  • 51419 - PLP-binding barrel
  • 50621 - Alanine racemase C-terminal domain-like
  • 0Direct
    48371,46785
  • 48371 - ARM repeat
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    48034,55931
  • 48034 - Guanido kinase N-terminal domain
  • 55931 - Glutamine synthetase/guanido kinase
  • 0Direct
    49348,55711
  • 49348 - Clathrin adaptor appendage domain
  • 55711 - Subdomain of clathrin and coatomer appendage domain
  • 0Direct
    57196,100895
  • 57196 - EGF/Laminin
  • 100895 - Kazal-type serine protease inhibitors
  • 0Direct
    46565,57938
  • 46565 - Chaperone J-domain
  • 57938 - DnaJ/Hsp40 cysteine-rich domain
  • 0Direct
    52518,52922
  • 52518 - Thiamin diphosphate-binding fold (THDP-binding)
  • 52922 - TK C-terminal domain-like
  • 0Direct
    64593,64593
  • 64593 - Intermediate filament protein, coiled coil region
  • 64593 - Intermediate filament protein, coiled coil region
  • 0Direct
    57938,49493
  • 57938 - DnaJ/Hsp40 cysteine-rich domain
  • 49493 - HSP40/DnaJ peptide-binding domain
  • 0Direct
    82919,53300
  • 82919 - Zn-finger domain of Sec23/24
  • 53300 - vWA-like
  • 0Direct
    161111,160240
  • 161111 - Cation efflux protein transmembrane domain-like
  • 160240 - Cation efflux protein cytoplasmic domain-like
  • 0Direct
    117281,50965
  • 117281 - Kelch motif
  • 50965 - Galactose oxidase, central domain
  • 0Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0Direct
    52833,47616
  • 52833 - Thioredoxin-like
  • 47616 - GST C-terminal domain-like
  • 0.0005457Direct

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    82754,55753,55753
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
  • 55753 - Actin depolymerizing proteins
  • 55753 - Actin depolymerizing proteins
  • 0Direct
    63737,55486,48371
  • 63737 - Leukotriene A4 hydrolase N-terminal domain
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 48371 - ARM repeat
  • 0Direct
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0Direct
    57938,49493,49493
  • 57938 - DnaJ/Hsp40 cysteine-rich domain
  • 49493 - HSP40/DnaJ peptide-binding domain
  • 49493 - HSP40/DnaJ peptide-binding domain
  • 0Direct
    46938,52087,101576
  • 46938 - CRAL/TRIO N-terminal domain
  • 52087 - CRAL/TRIO domain
  • 101576 - Supernatant protein factor (SPF), C-terminal domain
  • 0Direct
    46565,57938,49493
  • 46565 - Chaperone J-domain
  • 57938 - DnaJ/Hsp40 cysteine-rich domain
  • 49493 - HSP40/DnaJ peptide-binding domain
  • 0Direct
    90229,90229,90229
  • 90229 - CCCH zinc finger
  • 90229 - CCCH zinc finger
  • 90229 - CCCH zinc finger
  • 0Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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