SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Yeast Phenotype (YP): morphology

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: YP Hierarchy (yeast phenotype from Ascomycete phenotype ontology)

Shortest distance to current term (+ for parents, - for children) YP term [YP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ 1:   observable [APO:0000017] <7>
0:   morphology [APO:0000049] <2>(23|20) (25|7|2)
- 1:   cellular morphology [APO:0000050] <6>(18|16) (20|6|1)
- 1:   culture appearance [APO:0000158] <3>(5|2) (5|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
GINS helical bundle-like0Direct
F1F0 ATP synthase subunit C0Direct
PriA/YqbF domain0Direct
Cdc48 domain 2-like0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Cap-Gly domain0Direct
FtsH protease domain-like0Direct
Ribosomal protein L130Direct
S13-like H2TH domain0Direct
Nop domain0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Prefoldin0.001111Inherited
SAICAR synthase-like0.01018Inherited
PH domain-like0.02795Inherited
Smc hinge domain0.02909Inherited
Class II aaRS ABD-related0.03851Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.0728Inherited
Thiolase-like0.08891Inherited
Cyclin-like0.09924Inherited
PP2C-like0.1482Inherited
SH3-domain0.1488Inherited
Nucleotide-diphospho-sugar transferases0.2241Inherited
alpha/beta-Hydrolases0.5728Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
F1F0 ATP synthase subunit C0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Ribosomal protein S130Direct
Cdc48 domain 2-like0Direct
SWIRM domain0Direct
RNB domain-like0Direct
Cap-Gly domain0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
FtsH protease domain-like0Direct
Ribosomal protein L130Direct
Proteasome subunits0.001174Inherited
Prefoldin0.008199Inherited
Smc hinge domain0.02316Inherited
Actin/HSP700.05343Inherited
Cyclin0.09742Inherited
PP2C-like0.1299Inherited
SH3-domain0.137Inherited
GHMP Kinase, N-terminal domain0.1476Inherited
Pepsin-like0.233Inherited
Tyrosine-dependent oxidoreductases0.6388Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Ribosomal protein L130Direct
Cdc48 domain 2-like0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
FtsH protease domain-like0Direct
PriA/YqbF domain0Direct
S13-like H2TH domain0Direct
F1F0 ATP synthase subunit C0Direct
Nop domain0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Cap-Gly domain0Direct
GINS helical bundle-like0Direct
Prefoldin0.0009216Direct
SAICAR synthase-like0.008681Inherited
PH domain-like0.02431Inherited
Smc hinge domain0.02534Inherited
Class II aaRS ABD-related0.0338Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.06516Inherited
Thiolase-like0.08012Inherited
Cyclin-like0.08978Inherited
PP2C-like0.1359Inherited
SH3-domain0.1366Inherited
Nucleotide-diphospho-sugar transferases0.2095Inherited
Acid proteases0.4355Inherited
alpha/beta-Hydrolases0.5569Inherited
Sm-like ribonucleoproteins0.6543Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
50615,52540
  • 50615 - N-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    52540,140990
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 140990 - FtsH protease domain-like
  • 0Direct
    52540,47917
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct
    48371,-7
  • 48371 - ARM repeat
  • -7 - CATH
  • 0Direct
    81333,81333
  • 81333 - F1F0 ATP synthase subunit C
  • 81333 - F1F0 ATP synthase subunit C
  • 0Direct
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.06229Inherited
    52540,50447
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 0.06229Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    52540,50447,54980
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 54980 - EF-G C-terminal domain-like
  • 0Direct
    50615,52540,47917
  • 50615 - N-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)